Transcript Information: R_Transcript_55253.p1


Annotated TAIR IDAT5G55110.1
Annotated Gene NameStigma-specific Stig1 family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:22367870-22368361 | Forward length=163
E-Value1E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 169.933031127718
Replicate 259.067905388019
Replicate 358.784760337114
Condition 2: 8 Hour
Replicate 130.238568157743
Replicate 226.267300958019
Replicate 332.038686215502
Condition 3: 24 Hour
Replicate 163.341419941497
Replicate 259.522626403486
Replicate 373.310625336837


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_55253.p1 GENE.R_Transcript_55253~~R_Transcript_55253.p1 ORF type:complete len:166 (+),score=28.82,Stig1|PF04885.9|5.3e-39 R_Transcript_55253:184-681(+)
ATGGCAATTGCGATGAGGAAGACGCTGAAGGCGATCTTCCTTATCGCTATCACCATGGGAGTAGCCATTGCCCTAAGTACTATAAGCTACCAAAAACATGATGAACAACAAGTCAAGGTGATGCCTAATGAAAATATTGAGGATGACAATGTTCCTAATGTTTTGCCTTCAAAGAAGATAAGTAGGTTCCTAGCTGATAAGCCAGGCAATCCTTTTGGAAGGAACCCAAGAGCAGCTGATCATTGTAACAAAGACTATCAAGTTTGTGCCGTTGAACTTGGAGGCTCAGCCAATGCAACATGTTGTGGCAACAAGTGTTTTGACTTAGCCATTGCTAAGCATCATTGTGGTGCTTGTCATAAAAAGTGCAAGTACACCTACAATTGTTGTAATGGACAATGTGTTGACATTGCTTTTGACAAGAGGCATTGTGGTCGTTGCAACCAGAAGTGCTTGACTGGACAATACTGCATTTATGGGATGTGTGACTATGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_55253.p1 GENE.R_Transcript_55253~~R_Transcript_55253.p1 ORF type:complete len:166 (+),score=28.82,Stig1|PF04885.9|5.3e-39 R_Transcript_55253:184-681(+)
MAIAMRKTLKAIFLIAITMGVAIALSTISYQKHDEQQVKVMPNENIEDDNVPNVLPSKKISRFLADKPGNPFGRNPRAADHCNKDYQVCAVELGGSANATCCGNKCFDLAIAKHHCGACHKKCKYTYNCCNGQCVDIAFDKRHCGRCNQKCLTGQYCIYGMCDYA*

Click here to download the sequence:
Link to NCBI Protein BLAST