Transcript Information: R_Transcript_55290.p3


Annotated TAIR IDAT5G07950.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:2540530-2542047 | Reverse length=303
E-Value3E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.1921364311023
Replicate 20.22101368859261
Replicate 30.72337066093113
Condition 2: 8 Hour
Replicate 10
Replicate 20.23537770359143
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.46432123980163
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_55290.p3 GENE.R_Transcript_55290~~R_Transcript_55290.p3 ORF type:complete len:95 (+),score=8.58 R_Transcript_55290:1278-1562(+)
ATGTATGAAAGTACACCCACTTATTTCCCTTCTTTTAAGGTGAAAAAAACATCCACCAAAATAGCAAAAGCCCCAGAGAGGGAGGAAAAGAATAGGAAACAAAAGAACAAAAACTACCTAAACCAATATAATATCTGTACAGAGATACAGAACACTTGCAAATGTTGTTACCTGGAATGGCTGGATCAAGAGAAGCTAACACGCATTTCCTCACCAGCATTGGCAAATATTTCTTCCACCCTGTTTGAGTCTACATTCACTTCTACAAGCCACGTTGTTAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_55290.p3 GENE.R_Transcript_55290~~R_Transcript_55290.p3 ORF type:complete len:95 (+),score=8.58 R_Transcript_55290:1278-1562(+)
MYESTPTYFPSFKVKKTSTKIAKAPEREEKNRKQKNKNYLNQYNICTEIQNTCKCCYLEWLDQEKLTRISSPALANISSTLFESTFTSTSHVVR*

Click here to download the sequence:
Link to NCBI Protein BLAST