Transcript Information: R_Transcript_55300.p1


Annotated TAIR IDAT3G07880.1
Annotated Gene NameImmunoglobulin E-set superfamily protein
Annotated Gene Symbol(s)SCN1
Annotation TypeHomolog
Chromosome Positionchr3:2514175-2515544 | Forward length=240
E-Value1E-48
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.393357957919
Replicate 225.834157655076
Replicate 326.07356767857
Condition 2: 8 Hour
Replicate 121.777750851697
Replicate 224.31874707152
Replicate 329.193143347996
Condition 3: 24 Hour
Replicate 131.844700348106
Replicate 227.64530146653
Replicate 331.469879549825


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_55300.p1 GENE.R_Transcript_55300~~R_Transcript_55300.p1 ORF type:5prime_partial len:217 (+),score=67.07,Rho_GDI|PF02115.13|1.3e-69 R_Transcript_55300:1-651(+)
CTAGAAGAAGTAGCAGGGAGTTCTTCAGTTGGTGTTCTTGGGGAAAAGAATGAAAACCCAACTGAAAAAGAACAACAACAAGAAGAAGAAGAAACTGATGATGGGTCCTTTGATATTAATTTTTTTCCTGGCCCTCTTGTTCCTCTCCAACAACACCTTGACAAAGACAAGGATGATGAGAGCTTAAGGAGGTGGAAAGAGAAGCTATTAGGTTCTGTAGAAGGCGATTTAAATGGCCAAGTGGAACCTGAAGTTACATTTCACTCCATTGGAATGATATCGGATGCCCTTGGAGAATTCAATACCTCTTTGCCTCTTGATGAGAGCAACAGCAGCAAGATTTTGTTTTCACTCAAAGAGGGGTCTCAGTATCGTCTCAAGCTCTCATTCACTGTCAAGCATAATATTGTGTCTGGTCTGGCCTACTCTAATACTGTGTGGAGAAGTGGAATTCAAGTGGATCAAATGAAAGGAATGTTGGGTACATTTGCTCCTCAACAAGAACCCTACTTCCACCTGTTAGATGAGGAGACAACTCCATCTGGTGCACTAGCAAGGGGAATTTACTTGGCAAAGCTGAGGTTTGAAGATGATGACAAAAAATGTCACTTGGAGCTGAGTTACAGTTTTGAAATTAAAAAGAGGAGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_55300.p1 GENE.R_Transcript_55300~~R_Transcript_55300.p1 ORF type:5prime_partial len:217 (+),score=67.07,Rho_GDI|PF02115.13|1.3e-69 R_Transcript_55300:1-651(+)
LEEVAGSSSVGVLGEKNENPTEKEQQQEEEETDDGSFDINFFPGPLVPLQQHLDKDKDDESLRRWKEKLLGSVEGDLNGQVEPEVTFHSIGMISDALGEFNTSLPLDESNSSKILFSLKEGSQYRLKLSFTVKHNIVSGLAYSNTVWRSGIQVDQMKGMLGTFAPQQEPYFHLLDEETTPSGALARGIYLAKLRFEDDDKKCHLELSYSFEIKKRS*

Click here to download the sequence:
Link to NCBI Protein BLAST