Transcript Information: R_Transcript_55301.p1


Annotated TAIR IDAT3G07880.1
Annotated Gene NameImmunoglobulin E-set superfamily protein
Annotated Gene Symbol(s)SCN1
Annotation TypeHomolog
Chromosome Positionchr3:2514175-2515544 | Forward length=240
E-Value7E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0432418979163
Replicate 21.4101992816917
Replicate 32.7351328473018
Condition 2: 8 Hour
Replicate 12.1927640251264
Replicate 22.1693392831001
Replicate 33.5219542994781
Condition 3: 24 Hour
Replicate 12.569903794146
Replicate 20.8229574212902
Replicate 33.1034805153063


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_55301.p1 GENE.R_Transcript_55301~~R_Transcript_55301.p1 ORF type:internal len:134 (+),score=36.91,Rho_GDI|PF02115.13|5.1e-36 R_Transcript_55301:3-401(+)
ACTGAAAAAGAACAACAACAACAACAACAACAACAAGAAACTGATGATGGGTCTTTTGATAGTAATTATTTTCCTGGCCCTCTTGTTCCTCTCCAACAACACCTTGACAAAGACAAGGATGATGAGAGCTTAAGGAGGTGGAAAGAGAAGCTATTAGGTTCTGTAGAAGGCGATTTAAATGGCCAAGTGGAACCTGAAGTTACATTTCACTCCATTGGAATGATATCGGATGCCCTTGGAGAATTCAATACCTCTTTGCCTCTTGATGAGAGCAACAGCAGCAAGATTTTGTTTTCACTCAAAGAGGGGTCTCAGTATCGTCTCAAGCTCTCATTCACTGTCAAGCATAATATTGTGTCTGGTCTGGCCTACTCTAATACCGTGTGGAGAGGTGGAATG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_55301.p1 GENE.R_Transcript_55301~~R_Transcript_55301.p1 ORF type:internal len:134 (+),score=36.91,Rho_GDI|PF02115.13|5.1e-36 R_Transcript_55301:3-401(+)
TEKEQQQQQQQQETDDGSFDSNYFPGPLVPLQQHLDKDKDDESLRRWKEKLLGSVEGDLNGQVEPEVTFHSIGMISDALGEFNTSLPLDESNSSKILFSLKEGSQYRLKLSFTVKHNIVSGLAYSNTVWRGGM

Click here to download the sequence:
Link to NCBI Protein BLAST