Transcript Information: R_Transcript_55315.p1


Annotated TAIR IDAT3G01470.1
Annotated Gene Namehomeobox 1
Annotated Gene Symbol(s)ATHB-1, ATHB1, HD-ZIP-1, HAT5, HB-1
Annotation TypeHomolog
Chromosome Positionchr3:182648-184034 | Reverse length=272
E-Value1E-45
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.8448603580195
Replicate 24.5717750906456
Replicate 35.9114161538458
Condition 2: 8 Hour
Replicate 12.4683331600046
Replicate 23.4262641530849
Replicate 33.9523668286327
Condition 3: 24 Hour
Replicate 13.3325849201506
Replicate 25.8695447047504
Replicate 37.4135773939491


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_55315.p1 GENE.R_Transcript_55315~~R_Transcript_55315.p1 ORF type:complete len:248 (+),score=73.23,Homeobox|PF00046.25|2.3e-17,HALZ|PF02183.14|3.8e-16 R_Transcript_55315:782-1525(+)
ATGGAGGAAAATCCGGGAAGCTGGAAGAGACCATTTTTCAGCTCATTGCCGGAGGAATTCATTTACGAAGATGAATACTATGATGACCAGACGCCTGCGAAGAAGCGTCGCCTTACCCCTTCTCAGGTGAATTTGTTGGAGAAGAGTTTTGAGGAAGAAAACAAGCTGGAGCCGGAGAGAAAAGTTGAGCTGGCTAAGAAGCTGGGGCTGCAGCCAAGGCAGGTGGCTGTGTGGTTCCAAAACCGCCGTGCTCGGTCCAAGACCAAGCAGCTTGAGAGAGACTATGATCTCCTCAAGGCTTCCTATGATACTCTTCTGTCTAATTATGAAGCTATTCTTAAGGACAACGATGACCTCAAATATCAGGTGATTTCATTAACTGAGAAGCTTCAAACAAAGGATGAGGTTCTTGGGCCCCCAATCCCAAGAACATCTGGCCCAATACAAAAAGAGGAAGAAGTGAAACAGGCTCAAATATCAGCCCAACAACAATTGAGCTCAGGCAGCAGCACTGGAGCCTTAAGTGGGGTAGTGAATGAAGAGAATCCTCAGCTGGTGGTAGATGACAATAATGGGGATTCTTCCAATTTCTTTGAATCCCCACTTTTTAATCTTGTTGTTCCTCAAGAAAATGTCAGTGAAGATGACATTGACCACACCCCCTACTTGCCCTGCATGTTTACTGTTGATGACCATCACAAGGAGCAAGAGAAACATGATTTGGGATGGTGGGGTTGGTATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_55315.p1 GENE.R_Transcript_55315~~R_Transcript_55315.p1 ORF type:complete len:248 (+),score=73.23,Homeobox|PF00046.25|2.3e-17,HALZ|PF02183.14|3.8e-16 R_Transcript_55315:782-1525(+)
MEENPGSWKRPFFSSLPEEFIYEDEYYDDQTPAKKRRLTPSQVNLLEKSFEEENKLEPERKVELAKKLGLQPRQVAVWFQNRRARSKTKQLERDYDLLKASYDTLLSNYEAILKDNDDLKYQVISLTEKLQTKDEVLGPPIPRTSGPIQKEEEVKQAQISAQQQLSSGSSTGALSGVVNEENPQLVVDDNNGDSSNFFESPLFNLVVPQENVSEDDIDHTPYLPCMFTVDDHHKEQEKHDLGWWGWY*

Click here to download the sequence:
Link to NCBI Protein BLAST