Transcript Information: R_Transcript_55324.p1


Annotated TAIR IDAT3G23220.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:8287969-8288388 | Forward length=139
E-Value6.5E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.69535089351309
Replicate 21.7996828928255
Replicate 31.5271158397435
Condition 2: 8 Hour
Replicate 11.8655897102663
Replicate 20.85184311775945
Replicate 32.4202147493849
Condition 3: 24 Hour
Replicate 13.2796867468149
Replicate 22.520601016066
Replicate 33.7521779463253


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_55324.p1 GENE.R_Transcript_55324~~R_Transcript_55324.p1 ORF type:3prime_partial len:105 (+),score=23.48,AP2|PF00847.16|1.3e-14 R_Transcript_55324:82-393(+)
ATGGAGGATGATGGAGGTGGAGAGGTCAAGTATAGAGGTGTTCGAAAGCGGCCTTGGGGGAAATACGCGGCTGAGATTCGAGACTCAGCAAGGCAAGGTGCTCGTGTTTGGCTAGGCACATTCAACACGGCAGAAGAGGCAGCTCGAGCTTATGATCGAGCTGCCTATGCCATGAGAGGCCACTTAGCCATCCTTAATTTCCCAAGCGAGTACAATCTCATGCCTGGTGGCGGGTTTGCTTCATCTGGGGGTGCTTCATCCTCGTCGAGCACCCCCAGGAATGCAAGCCAAGGCAGAGGCAGAGGCAGAGGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_55324.p1 GENE.R_Transcript_55324~~R_Transcript_55324.p1 ORF type:3prime_partial len:105 (+),score=23.48,AP2|PF00847.16|1.3e-14 R_Transcript_55324:82-393(+)
MEDDGGGEVKYRGVRKRPWGKYAAEIRDSARQGARVWLGTFNTAEEAARAYDRAAYAMRGHLAILNFPSEYNLMPGGGFASSGGASSSSSTPRNASQGRGRGRG

Click here to download the sequence:
Link to NCBI Protein BLAST