Transcript Information: R_Transcript_55329.p1


Annotated TAIR IDAT5G28950.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 448 Blast hits to 446 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 21; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10992505-10993435 | Forward length=148
E-Value3E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.42696984689401
Replicate 20.2455707651029
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.26153078176825
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.12897812216712
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_55329.p1 GENE.R_Transcript_55329~~R_Transcript_55329.p1 ORF type:internal len:171 (+),score=23.04,DDE_Tnp_4|PF13359.2|2.2e+03,DDE_Tnp_4|PF13359.2|4.1e-09 R_Transcript_55329:3-512(+)
TTGAATCAGGTTGGACTCTTCTTCTTCTTCACTCAGCCGACCTACCTCAAGAAGAAAGAGAAAGAAAGGGGGATCACCATAACTATCACCCAGACAGTAGGCACTTCCAAGCACCAACTACCAGATTCTCAAGAGTGTTTTCAACACTCTGGTGAAACGGTGAGTAGAGTTTTTAAAGAAGTTCTAACTGCTATGGATGGCCTCTCAAGAGATATACTTGTGCCAAGAGATCCCGAATTCAAGGAGATTCCATCACAAATTGCAAATGATACTAGATATATGCCACATTTTAAGGATTGCATTGGAGCTATTGATGATACTCATATATCATTGATTGTCCCAGAGGAGGATCAAATTCGATATAGAGGAAGAAAAATGATACCAACTACCAACGTTTTAGCAGCATGTGACTTTGATTTGCTATTCACATATGTTTTAACGGGATGGGAAGGATCAGCACATGATACACGCATTTTCCTGGACACAATCAACAATCCAAGTCTCAAATTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_55329.p1 GENE.R_Transcript_55329~~R_Transcript_55329.p1 ORF type:internal len:171 (+),score=23.04,DDE_Tnp_4|PF13359.2|2.2e+03,DDE_Tnp_4|PF13359.2|4.1e-09 R_Transcript_55329:3-512(+)
LNQVGLFFFFTQPTYLKKKEKERGITITITQTVGTSKHQLPDSQECFQHSGETVSRVFKEVLTAMDGLSRDILVPRDPEFKEIPSQIANDTRYMPHFKDCIGAIDDTHISLIVPEEDQIRYRGRKMIPTTNVLAACDFDLLFTYVLTGWEGSAHDTRIFLDTINNPSLKF

Click here to download the sequence:
Link to NCBI Protein BLAST