Transcript Information: R_Transcript_55348.p1


Annotated TAIR IDAT2G16390.1
Annotated Gene NameSNF2 domain-containing protein / helicase domain-containing protein
Annotated Gene Symbol(s)DRD1, CHR35, DMS1
Annotation TypeOrtholog
Chromosome Positionchr2:7097638-7101182 | Forward length=888
E-Value1.5e-318
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.4485176990108
Replicate 23.671998727514
Replicate 36.4200497747064
Condition 2: 8 Hour
Replicate 15.3528516420547
Replicate 25.8910394985186
Replicate 37.1222687411832
Condition 3: 24 Hour
Replicate 17.6697607106007
Replicate 25.1676559508191
Replicate 38.3428470779654


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_55348.p1 GENE.R_Transcript_55348~~R_Transcript_55348.p1 ORF type:complete len:892 (+),score=212.59,SNF2_N|PF00176.19|2.5e-19,Helicase_C|PF00271.27|1.1e+03,Helicase_C|PF00271.27|1.5e-09,ResIII|PF04851.11|2e-07 R_Transcript_55348:195-2870(+)
ATGAATATGAACCGGCCAGCTGGAGAGGTGTTTGCTAGTAATCCACCTTCACAGTCGTTGTACAACAACACCAACCTTCATGATCATTATACACCAAGGAGTAAGAGGATGAAGTTGTCTGATGAAGGAGGAGAAAGTAGCAGAATAGTTGATTATTCTGATCATTATGCCATTCCAGATCTACTAGCAAGCATCAGCTCGGGTAAGTATGGAAGTGTGACAAAAGACATTCAAGCATTGGTTGCAAGGAAGATGCAGTTGATGAACTCATTAATAACAATGCATCCCGACCTTGAGGACAAAAATCTGGGGACAAGATACAACTTGGGTGGAGAAGTATCAAACCCAGTGAATTCAGAAGTTGTTGATTTGGATAATGTTGAGGCTACAGCTATTGTCCCATCTACGGGTCCTGTGGTGATAATTGATTCAGATGATGAAGAGAGTGAAGACAGAAAGCCGTTCCCTCACTTTCAAGAGATCGCCATTCCTAGGCCTCCTGTTGGATTGTTTATGGAGAATGCCTTTCCTAGGACTCCTGTTGGACTCCTTACCGAGAACTTTCTGGTTGATAATGACAAGCGCGCGAATGCTGTCAAGGAAGAAGATAGAAGAGGTGACAAGGTTAAGGACAAAGGTCTATACCTTGGTGTTGATGATGAGTTAAATGAGGAAAATGATAGGCACGCTGTTGAAGATGACAGGCTGGCGGACATATGGAAGGAGATGAATGTTGCCTTAGAATTTTCCAAGGATGTATCAGCTGACCACTCATCTGATGATCATACAACGGAAGATGATGAGGGATGTGACCATTCATTCGTCCTTAAAGATGATCTTGGTTATGTCTGCCGTGTTTGTGGAGTCATTCAAAGGGCTATTGAGACTATATTTGACTTCCAGTACATTAAGGCTGCTCGAATAAGAAATTATAGATCTGATTCACGGTCTGGACGAGATAATGAAGACGCCGGGCATCTGGATGGGGTCAAGCTGCCTGGCCATGATTTGGCTGTGACTGAAATTAGCCCTCATCCAAGGCACAAGAAGCAAATGAAGCCCCATCAACTAGAGGGTTTCAACTTTTTATTAAGCAACTTAATAACTGAGCATCCTGGTGGCTGCATCTTGGCCCATGCTCCTGGGTCAGGAAAGACTTTCATGATTATCAGTTTTATGCAGAGTTTTTTGGCGAAGTATCCAGATGCTAGGCCCTTAGTTGTGCTACCAAAGGGCATTCTTCCTACATGGAAAAAAGAGTTTCAGAGATGGCAAGTGGAGGACATTCCTTTGCTTGATTTTTACTCCCAGAAAGCTGATGGCAGGATTCAGCAAATTGAAATATTGAAACAGTGGGTATCCCTCAGAAGCATACTGTTTTTAGGCTATAAGCAGTTCGCTTCTATTGTCACTGGTGCAAGCACGTGCAAGATCACTGCCAACTGTCAAGAGATATTGTTGAAGTGCCCTACTATTCTTATTTTGGATGAAGGACACACTCCAAGAAATGAGAATACTGATGTGCTGCACTCTCTGGCAAAGGTTCAGACACCGAGGAAGGTTGTCTTATCAGGTACGTTGTACCAAAACCATGTCAAGGAGGTGTTCAATATTTTAAATCTGGTCCGCCCAAAATTTTTGAAGCTGGATATGTCAAGAAGCATAAAGAAGAGGATCATGAGCCGGGTGCAGTTTGTTGGGTATAAGAAGCACTTGAAAGGGAATGCGGAGAGCAACTTCTTTGACCTTGTCGAACACACCCTCCAGCAAGATGAGGATTTTAAAAGAAAGGAGGCAGTGATAAAGGATCTGAGGGAGATGACTAGCAAGGTTCTCCATTACTACAGGGGAGATTTCTTGGATGATCTCCCTGGACTTGTGGACTTCACTGTTCTTCTTGGTTTGAGCCATCAACAGAAATGTGAAGTGGGCAGGATGAAGAAGACAGCAAGAGGTAGTAAATTCAGACAGAGTTCTTTGGGTTGTGCTGTGTACACACACCCAGTGCTCAAACAGTATGAAAAAATCCACATGCTTGGTGATTCAAAGGTTGATGAGCTGGTTGAAAAGATAAACATCAGAGAAGGAGTGAAGGCTAAGTTCTTCATCAACTTGCTTCACTTGTGCGAAGGTGCTGATGAGAAACTATTAGTTTTCAGCCAGTACCTGGATCCATTGAAGTTTTTGGAACGCTTAGCTGTCTGGAAGAAGGGCTGGTCTGTGGGAAAGGAGTTGTTTATGATCATTGGTGATTCAACCTCTGAACAAAGAGAGTTCGCCATGGATCGTTTCAACAACTCCCCTGATGCAAAGGTCTTTTTTGGATCAATCAAGGCCTGTGGAGAAGGAATTTCTCTAGTCGGTGCCTCTCGTATATTGATCTTGGATGTGCACCTGAATCCTTCTGTGTCACGCCAAGCAATCGGGCGTGCATTTCGACCTGGCCAGCTGAAGAAAGTTTACACCTACAGGCTGGTTGCAGCAGAATCACCTGAAGAGGAGGACCATCTTACATGTTTCAAGAAGGAACAAATTGCAAAAAGGTGGTTTGAGTGGAATGAATACTGTGGAAGCCAGGACTTTCAGATGGAGCCTGTAGATCTTAGAGAGTGTGGGGATTTATTCCTGGAGAGTCCAGAGTTGTCCGAAGATGTGAAGGCGTTGTACAAAAGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_55348.p1 GENE.R_Transcript_55348~~R_Transcript_55348.p1 ORF type:complete len:892 (+),score=212.59,SNF2_N|PF00176.19|2.5e-19,Helicase_C|PF00271.27|1.1e+03,Helicase_C|PF00271.27|1.5e-09,ResIII|PF04851.11|2e-07 R_Transcript_55348:195-2870(+)
MNMNRPAGEVFASNPPSQSLYNNTNLHDHYTPRSKRMKLSDEGGESSRIVDYSDHYAIPDLLASISSGKYGSVTKDIQALVARKMQLMNSLITMHPDLEDKNLGTRYNLGGEVSNPVNSEVVDLDNVEATAIVPSTGPVVIIDSDDEESEDRKPFPHFQEIAIPRPPVGLFMENAFPRTPVGLLTENFLVDNDKRANAVKEEDRRGDKVKDKGLYLGVDDELNEENDRHAVEDDRLADIWKEMNVALEFSKDVSADHSSDDHTTEDDEGCDHSFVLKDDLGYVCRVCGVIQRAIETIFDFQYIKAARIRNYRSDSRSGRDNEDAGHLDGVKLPGHDLAVTEISPHPRHKKQMKPHQLEGFNFLLSNLITEHPGGCILAHAPGSGKTFMIISFMQSFLAKYPDARPLVVLPKGILPTWKKEFQRWQVEDIPLLDFYSQKADGRIQQIEILKQWVSLRSILFLGYKQFASIVTGASTCKITANCQEILLKCPTILILDEGHTPRNENTDVLHSLAKVQTPRKVVLSGTLYQNHVKEVFNILNLVRPKFLKLDMSRSIKKRIMSRVQFVGYKKHLKGNAESNFFDLVEHTLQQDEDFKRKEAVIKDLREMTSKVLHYYRGDFLDDLPGLVDFTVLLGLSHQQKCEVGRMKKTARGSKFRQSSLGCAVYTHPVLKQYEKIHMLGDSKVDELVEKINIREGVKAKFFINLLHLCEGADEKLLVFSQYLDPLKFLERLAVWKKGWSVGKELFMIIGDSTSEQREFAMDRFNNSPDAKVFFGSIKACGEGISLVGASRILILDVHLNPSVSRQAIGRAFRPGQLKKVYTYRLVAAESPEEEDHLTCFKKEQIAKRWFEWNEYCGSQDFQMEPVDLRECGDLFLESPELSEDVKALYKR*

Click here to download the sequence:
Link to NCBI Protein BLAST