Transcript Information: R_Transcript_55390.p1


Annotated TAIR IDAT5G59380.1
Annotated Gene Namemethyl-CPG-binding domain 6
Annotated Gene Symbol(s)MBD6, ATMBD6
Annotation TypeOrtholog
Chromosome Positionchr5:23952321-23953485 | Forward length=225
E-Value1.2E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.657009470706
Replicate 219.35756477405
Replicate 323.018477779548
Condition 2: 8 Hour
Replicate 116.483167623024
Replicate 220.070254920869
Replicate 316.646355105526
Condition 3: 24 Hour
Replicate 120.606031853159
Replicate 220.871805974498
Replicate 317.723702331829


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_55390.p1 GENE.R_Transcript_55390~~R_Transcript_55390.p1 ORF type:complete len:205 (+),score=30.59,MBD|PF01429.15|1.1e-12 R_Transcript_55390:388-1002(+)
ATGGACCAACTCCCACCCGACCCACTTCTACAGCCAGGAACATTCATTGACCCCAACCCAACTTCTAACGGAGACTCCAAACCCGAACCCATTCCGGATCCCATCGAACAGCAGATGCCGCCGGCGGATCAAAAGCCCGAGTCGGAGGCTCCGGCGTCTACTAGACCCGAATGGTTGCCTCCAGGTTGGTCGTTTGTAGAACGGGTTAGGGTTTCTGGTGCATCTGCTGGCACCCGAGACAAGTATTATTTGGATCCAGTCACCAATCGTCGGTTCCGGTCAAAAAAGGAAGTTCTTTTCTATCTGGAAAATGGAACACCCATTAGCAGCAAGAAGAAGAATGCAACTGCAGTTCCTGATGCTGATAGCAAGCCACAAACCAACTCTTCAGCCTGTAAACGGAGGAAGTCTGAATCAAAGATTATGACGAGTGTCAAGAGATTTAATTTTGATGAAGTTCCGACAAAGGTTAAATGGGAGCTGACAGATATTTATGAAGGGACGTGGAGGCCTATGATTAATGGTGTTGATAGGGTGCCCGAATCTACAAAGCAAGACTGGGCTACTGTATTCTCATACCTTACAACGCAAAATGGTGCTACTGCATTGTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_55390.p1 GENE.R_Transcript_55390~~R_Transcript_55390.p1 ORF type:complete len:205 (+),score=30.59,MBD|PF01429.15|1.1e-12 R_Transcript_55390:388-1002(+)
MDQLPPDPLLQPGTFIDPNPTSNGDSKPEPIPDPIEQQMPPADQKPESEAPASTRPEWLPPGWSFVERVRVSGASAGTRDKYYLDPVTNRRFRSKKEVLFYLENGTPISSKKKNATAVPDADSKPQTNSSACKRRKSESKIMTSVKRFNFDEVPTKVKWELTDIYEGTWRPMINGVDRVPESTKQDWATVFSYLTTQNGATALF*

Click here to download the sequence:
Link to NCBI Protein BLAST