Transcript Information: R_Transcript_55393.p1


Annotated TAIR IDAT3G46580.1
Annotated Gene Namemethyl-CPG-binding domain protein 5
Annotated Gene Symbol(s)MBD05, MBD5, ATMBD5
Annotation TypeHomolog
Chromosome Positionchr3:17148397-17149328 | Forward length=182
E-Value2E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.9421280489998
Replicate 27.533023813481
Replicate 36.6447025088076
Condition 2: 8 Hour
Replicate 15.9812799871133
Replicate 25.6328938989246
Replicate 36.3738480041053
Condition 3: 24 Hour
Replicate 16.3090157266973
Replicate 25.8926264211466
Replicate 38.1870040431906


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_55393.p1 GENE.R_Transcript_55393~~R_Transcript_55393.p1 ORF type:internal len:131 (-),score=20.75,MBD|PF01429.15|3.3e-12 R_Transcript_55393:1-390(-)
GAGGACCCGAACAGAATGGACCAACTCCCACCCGACCCACTTCTACAGCCAGGAACATTCATTGACCCCAACCCAACTTCTAACGGAGACTCCAAACCCGAACCCATTCCGGATCCCACCGAACAGAAGATGCCGCCAGCGGATCAAAAGCCCGAGCCGGAGGCTCCGGCGTCTACTAGACCCGATTGGTTGCCTCCAGGTTGGTCGTTTGTAGAACGGGTTAGGGTTTCTGGTGCATCTGCTGGCACCCGAGACAAGTATTATTTGGATCCAGTCACCAATCGTCGGTTCCGGTCAAAGAAGGAAGTTCTTTTCTATCTGGAAAATGGAACACCCATTAGCAGCAAGAAGAAGAATGCAACTGCAGTTCCTGATGCTGATAGCAAGCCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_55393.p1 GENE.R_Transcript_55393~~R_Transcript_55393.p1 ORF type:internal len:131 (-),score=20.75,MBD|PF01429.15|3.3e-12 R_Transcript_55393:1-390(-)
EDPNRMDQLPPDPLLQPGTFIDPNPTSNGDSKPEPIPDPTEQKMPPADQKPEPEAPASTRPDWLPPGWSFVERVRVSGASAGTRDKYYLDPVTNRRFRSKKEVLFYLENGTPISSKKKNATAVPDADSKP

Click here to download the sequence:
Link to NCBI Protein BLAST