Transcript Information: R_Transcript_55400.p1


Annotated TAIR IDAT3G61150.1
Annotated Gene Namehomeodomain GLABROUS 1
Annotated Gene Symbol(s)HDG1, HD-GL2-1
Annotation TypeHomolog
Chromosome Positionchr3:22630769-22634875 | Forward length=808
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.7359504464895
Replicate 23.2431036595081
Replicate 34.819260373092
Condition 2: 8 Hour
Replicate 14.5320042978257
Replicate 23.9005000282228
Replicate 34.0605467166778
Condition 3: 24 Hour
Replicate 17.7341214761773
Replicate 26.0791459258981
Replicate 36.2369757696352


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_55400.p1 GENE.R_Transcript_55400~~R_Transcript_55400.p1 ORF type:complete len:751 (+),score=148.70,START|PF01852.15|1.1e-43,START|PF01852.15|9e+02,Homeobox|PF00046.25|9.6e-18 R_Transcript_55400:349-2601(+)
ATGGAAGAGCAAGGGGAAATGGGATATTATGGGGATCATTTTGACCCAGATAACATAATGGCTAGTAGGGAGGGAGAAGATTCTGGAAGTGGCAACTATGACACTGTCTCTATTGAGGATAATCCTGAAGGAGCTTCTGAGAACATTAATAATAATAGTAGAGCAGCCAGGAGGAAAAGATACCATAGGCACACTCCTCAGCAAATTCAGGAACTTGAGAATTTCTTTAAGAACTGTGCTCACCCAGATGAGAAACAAAGATTGGAACTCGGAAGGAGACTTGGATTGGAGAGCAGGCAGGTTAAGTTTTGGTTTCAGAATCGTCGGACCCAAATGAAGACCCAAATGGAGCGGCATGAGAATGTGATTCTTAAGCAAGAATATGATAAGCTTCGTGTTGAAAACATAGCGATGAAGGATGCTATGAGGAACCCTATTTGTCAAAATTGTGGTGGCCCGGCTGTACTAGGGGAGGTATTGATGGATGAACATCAGCTTAGGGTTGAGAATGCTCGTCTAAGGGATGAATTGACACGTGTATGTGCGCTTGCTGAGAAGTTCTTGGGGAAGCCCGTGTCAGATTTTGTGAGTGCAGTTTCATCTCCGGCATCTAATTCCAATTTGGAGCTGTCTATGGGGAGGGCAGGATTTAATGGTATAATGAATGCACCTACCCCATTGCCCATGGCACTTAATCTTGAAAATGGGGTTTCGGCTAACTCAACCATCGCTCCTTCAATGAATGGTTCTATCAATGGTTTCATCAGTAGTGAATATGAGAAGACCATGTTTATGCAAGCTGCAATGGCTGCTATGGATGAATTGCTCGCCATGGCTCAAACTGATAACCCCTTGTGGTTGAAAGGTTTGGATGATGCAAGGGAAGTACTAAATCTTGATGAGTATGTGAAGAAGTTCTCTCCTTTCGCTGGGGTAAAACCTTGTGGCTTTATTACTGATGCTACAAGGGAGACAGGTTCAGTGTTCATCACTAGCTTGGAGCTTGTAGAAACAATGATGATACCTAGCCGATGGGAAGACATGTTTCCTTGTGTGATTAGCAAAGCCTCTACTATTGAGGTTCTTTTCAGTGGTGCTGGTGGGACCCGGGATGGTGAATTGCAGTTGATGAATGCGGAGTTTGTATTTCCCTCACCGTTTGTGCCTCTCCGCCAAGAGAAAATCTTACGGTACTGCAAGCAGCATTCAGAGGGCATGTGGGCCATAGTTGATATATCTGTTGACTCTATCCGAGATTCAGGATCATCCATGAAGTGGAGGAGACTTCCTTCTGGTTGTATTGTGCAAGATGTGGCCAATGGCTATTCCCTGGTTACATGGATTGAACATGTGGAATACGACGAAAGTTGTATTCATCAACTGTATCGGTCATTGCTGCGGTCTGGATTAGCATTTGGCGCCCAAAGGTGGCTTGCCACCTTACAGAGGGAACGTGAATGTGCTTCTATTTTCATGTCTGCCAGAATTACAACTGACAATAATGCAGTGGCAGTTATCACTCAAGATGGCAGAAGGAGCATCCTAAAGCTGATGAGGCGCATAAGCAACAACTTCTGCTCTGGGCTCTGTGCCTCATCATCACGACGGTGGGAGCGGCTGCAGGTTGGAGGGTTGGCAGCTGATGTGCGTGTGATGAGTCGTGTCAGCGTAAACGAGCCTGGTGAGCCCTCAGGTGTTGTGTTGAGTGCCTCAACTTCAGTTTGGATGCCAGTACCACGGCAGCACCTTTTTGACTTCCTGAGGGACGAAAAACTACGGGGCAAATGGGACATCTTAGCCAATGGTGGGCCCATGGAAGTGATAGCCCGCCTTCCCAAGAGCCAGGATGAGACTAATTGCATTTCCCTCTTCTGTCCACCGGCTGCACCATCGAGAGAGAGCAACATGTTGATACTACAAGAATCGTGGATGGACCGAACAGGCTCTTTCATAGTGTATGCTCCAGTTGACTCAGCATCAATGGATTCAGTCATGAGGGGCGGAGATTCTGACTATCTGGCTCTTTTACCCTCGGGTTTTGCAATCGCTGATGGGCCCATACATCCAAACGTGCCTTCATTGACCAGCACTGTTACTGGTGGTGGAGGCAGTGCGTCTGTATTGACCCTAGGATTTCAAATTCTGGTCAACAGCCTCCCAACAGCAAAGCTCACTGTCGAATCCATCGTTACAGTCAACAACCTAATGTCCTGCACAATCCAGAAGATCCGAGATTCCCTTGGTGTCAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_55400.p1 GENE.R_Transcript_55400~~R_Transcript_55400.p1 ORF type:complete len:751 (+),score=148.70,START|PF01852.15|1.1e-43,START|PF01852.15|9e+02,Homeobox|PF00046.25|9.6e-18 R_Transcript_55400:349-2601(+)
MEEQGEMGYYGDHFDPDNIMASREGEDSGSGNYDTVSIEDNPEGASENINNNSRAARRKRYHRHTPQQIQELENFFKNCAHPDEKQRLELGRRLGLESRQVKFWFQNRRTQMKTQMERHENVILKQEYDKLRVENIAMKDAMRNPICQNCGGPAVLGEVLMDEHQLRVENARLRDELTRVCALAEKFLGKPVSDFVSAVSSPASNSNLELSMGRAGFNGIMNAPTPLPMALNLENGVSANSTIAPSMNGSINGFISSEYEKTMFMQAAMAAMDELLAMAQTDNPLWLKGLDDAREVLNLDEYVKKFSPFAGVKPCGFITDATRETGSVFITSLELVETMMIPSRWEDMFPCVISKASTIEVLFSGAGGTRDGELQLMNAEFVFPSPFVPLRQEKILRYCKQHSEGMWAIVDISVDSIRDSGSSMKWRRLPSGCIVQDVANGYSLVTWIEHVEYDESCIHQLYRSLLRSGLAFGAQRWLATLQRERECASIFMSARITTDNNAVAVITQDGRRSILKLMRRISNNFCSGLCASSSRRWERLQVGGLAADVRVMSRVSVNEPGEPSGVVLSASTSVWMPVPRQHLFDFLRDEKLRGKWDILANGGPMEVIARLPKSQDETNCISLFCPPAAPSRESNMLILQESWMDRTGSFIVYAPVDSASMDSVMRGGDSDYLALLPSGFAIADGPIHPNVPSLTSTVTGGGGSASVLTLGFQILVNSLPTAKLTVESIVTVNNLMSCTIQKIRDSLGVN*

Click here to download the sequence:
Link to NCBI Protein BLAST