Transcript Information: R_Transcript_55480.p1


Annotated TAIR IDAT2G38025.1
Annotated Gene NameCysteine proteinases superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:15915239-15916692 | Reverse length=234
E-Value1.7E-92
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.4548347279433
Replicate 27.9985906347802
Replicate 310.412153452797
Condition 2: 8 Hour
Replicate 19.5399473820436
Replicate 29.6800354290847
Replicate 38.8007809068543
Condition 3: 24 Hour
Replicate 111.230442496669
Replicate 29.4522538102474
Replicate 38.3381732140561


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_55480.p1 GENE.R_Transcript_55480~~R_Transcript_55480.p1 ORF type:complete len:231 (+),score=44.52,OTU|PF02338.15|7e-13 R_Transcript_55480:209-901(+)
ATGGCGGCTACATTTTCAAATGACATCATTCTTGAGCAACTGAGAAGTGGCACTGCTGAATTTGAGCTTGTGTCTTCTCCGGTTCCCTCAGTTTCTAAATTCAGCTCAATTATGAGCTCATTACAGCTTTTTCAGGATAAGAGCAGCTCCCGATTCTTTGCTAGAATTGGACCTTCATTAGGTGCGGCAGCACCTTCCTCTTTCAAAAAGACCGAGCACTACGGAGTCCAGAAGGTTGCTGGGGATGGCCGGTGCATGTTTCGTGCTCTGGTTAAAGGCATGGCTAGGAACAAAGGCATCACGCTCACATCACGGCAAGAGCGAGATGATGCTGATGAGTTAAGAGCTGCTGTGAAAGAGGTTATATGTGAAGATGGTGAAGAGCGTCGCCGTTATCAAGAAGCAGTTATTGCGATTACAGTGGATGAGCCTTTGCAACGTTATTGCCAACGTATTGGCCGATCTGACTTCTGGGGTGGAGAATCTGAGCTGCTGGTGTTGTCAAAGTTGTGCCGTCAGCCGATCATTGTGTATATACCAGAGCATGAGCACAAGCATAGCAGCTCAGGCTCAGGTTTCATTCCTATAGCAGAGTATGGAGCCGAATATCGCAAAGCTTCAGGAAAGAAAGAACCACGGAAAGCAGTGAGACTTCTTTATAGCGGAAGGAATCATTATGATCTACTTGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_55480.p1 GENE.R_Transcript_55480~~R_Transcript_55480.p1 ORF type:complete len:231 (+),score=44.52,OTU|PF02338.15|7e-13 R_Transcript_55480:209-901(+)
MAATFSNDIILEQLRSGTAEFELVSSPVPSVSKFSSIMSSLQLFQDKSSSRFFARIGPSLGAAAPSSFKKTEHYGVQKVAGDGRCMFRALVKGMARNKGITLTSRQERDDADELRAAVKEVICEDGEERRRYQEAVIAITVDEPLQRYCQRIGRSDFWGGESELLVLSKLCRQPIIVYIPEHEHKHSSSGSGFIPIAEYGAEYRKASGKKEPRKAVRLLYSGRNHYDLLV*

Click here to download the sequence:
Link to NCBI Protein BLAST