Transcript Information: R_Transcript_5552.p1


Annotated TAIR IDAT2G26770.1
Annotated Gene Nameplectin-related
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:11404257-11407743 | Reverse length=496
E-Value2E-187
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 156.820512062899
Replicate 238.46429690589
Replicate 348.653153406704
Condition 2: 8 Hour
Replicate 135.008715998954
Replicate 243.181758045926
Replicate 348.154272802845
Condition 3: 24 Hour
Replicate 151.923856016378
Replicate 240.525778732824
Replicate 354.267036413795


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_5552.p1 GENE.R_Transcript_5552~~R_Transcript_5552.p1 ORF type:5prime_partial len:363 (+),score=102.57,SCAB-IgPH|PF16709.1|5.3e+03,SCAB-IgPH|PF16709.1|6e-106,SCAB_CC|PF16712.1|1.6e-58 R_Transcript_5552:3-1091(+)
ACAGCTATTGCCATGGTTGAAGCATTAGCTGTTCAGTTAGCACAAAGGGAAGGAGAACTGATTCAAGAAAAGGAGGAAGTCAAAAAGCTAGCAAACTTTTTGAAGCAGGCTTCAGAAGAAGCAAAAAGGCTTGTTGAGGAGGAGAGAGCTATTGCTCGTGCTGAAATTGATAATGCAAGAGCAGCAGTTCAGCAAGTGGAGGAAGCCATTCAGGAGCATGAAAAAATGTCCCGAGCTTCAGGAAAGCAGGACTATGAAGAATTAATGAAGGAGGTTCAAGAGGCTAGGCGCATCAAAATGCTGCATCAACCTAGCAAGGTTATGGACATGGAATATGAACTTCGTGCATTAAGGGCTCAGCTCTTGGAGAAATCGAAACACTCAGTTGAGCTCCAAAAAGAGCTTTTAATGAAGAAAAGACACGAGGTTGAAATGTCTCATCTGTATGAGATGGATGGGCAAGAGTTATTAGGTTCATACTTACGGGTCCAAAAACGTTCTGATGAGGCTGCAGATTTATCAGAGTGCTTGATTCAATGGTACAGAGTGACATCAGACAGCGAGAAAAAGGAACTTATTTCAGGGGCCAATAAACCTGTTTATGCTCCAGAGCCTTTTGATGTTGGCTGTATCTTGAAGGCAGAAATCACTTGCGGTGACCAAAAGGTTACTGTGTCCACCACCGGACCTATTGATCCAGCCCCAGGTTTGGGAAGCTATGTTGAGGCCCTTGTGCGTAGGCATGACACTGAATTTAATGTTATTGTCACTCAGATTAATGGTATAGATCAACAATCACAAGCTATTCATGCTCTCCATGTTGGGAAGATGAGGATGAAGCTTTGTAAGGGGAAGACAACTGTTACCAAGGAATACTATTCCTCTGCAATGCAGCTTTGTGGGGTTAGAGGCGGTGGTAATGCTGCACCTCAGGCGGTGTTTTGGCAAGCAAAACAGGGGCAAAGTTTCATCATAGCATTTGAATCAGAAAGGGATAGAAATGCAGCCATTATGCTTGCCAGGAGGTTTGCCTTCGATTGTAATATTATGCTAGCCGGTCCTGGTGACCGGACGCTCCCAGGGACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_5552.p1 GENE.R_Transcript_5552~~R_Transcript_5552.p1 ORF type:5prime_partial len:363 (+),score=102.57,SCAB-IgPH|PF16709.1|5.3e+03,SCAB-IgPH|PF16709.1|6e-106,SCAB_CC|PF16712.1|1.6e-58 R_Transcript_5552:3-1091(+)
TAIAMVEALAVQLAQREGELIQEKEEVKKLANFLKQASEEAKRLVEEERAIARAEIDNARAAVQQVEEAIQEHEKMSRASGKQDYEELMKEVQEARRIKMLHQPSKVMDMEYELRALRAQLLEKSKHSVELQKELLMKKRHEVEMSHLYEMDGQELLGSYLRVQKRSDEAADLSECLIQWYRVTSDSEKKELISGANKPVYAPEPFDVGCILKAEITCGDQKVTVSTTGPIDPAPGLGSYVEALVRRHDTEFNVIVTQINGIDQQSQAIHALHVGKMRMKLCKGKTTVTKEYYSSAMQLCGVRGGGNAAPQAVFWQAKQGQSFIIAFESERDRNAAIMLARRFAFDCNIMLAGPGDRTLPGT*

Click here to download the sequence:
Link to NCBI Protein BLAST