Transcript Information: R_Transcript_55525.p1


Annotated TAIR IDAT5G66760.1
Annotated Gene Namesuccinate dehydrogenase 1-1
Annotated Gene Symbol(s)SDH1-1
Annotation TypeOrtholog
Chromosome Positionchr5:26653776-26657224 | Forward length=634
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1116.680320027
Replicate 288.503392894016
Replicate 3106.70480297955
Condition 2: 8 Hour
Replicate 194.22408789826
Replicate 2116.82853139176
Replicate 3159.31484827735
Condition 3: 24 Hour
Replicate 1133.64204555494
Replicate 2126.08488982857
Replicate 3120.31311088969


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_55525.p1 GENE.R_Transcript_55525~~R_Transcript_55525.p1 ORF type:complete len:632 (+),score=134.09,FAD_binding_2|PF00890.20|4.2e-125,Succ_DH_flav_C|PF02910.16|1.8e-44 R_Transcript_55525:139-2034(+)
ATGATGTGGAGGTGTGTGAGACGTGGTCTTCGATCTCACTCCAACAAGTTTTCGATCTCCTCTCATTCTCCTCTTTCCAGATTCTTCTCCTCTGATTCCAATTTGGGAGGGTCAGCGTACACGGTGGTGGACCACACATACGATGCGCTGGTGGTCGGTGCCGGAGGAGCCGGTCTTAGAGCCGCTATTGGTCTCTCCGAGCATGGCTTTAACACCGCTTGCATTACTAAGCTTTTCCCTACTCGTTCCCACACTGTTGCTGCTCAGGGTGGAATTAATGCCGCCTTGGGGAATATGACTGAGGATGACTGGAGATGGCACATGTATGACACCGTCAAAGGAAGCGACTGGCTAGGTGATCAGGATGCTATACAGTACATGTGCAGAGAGGCACCAAAAGCAGTGATTGAACTTGAAAACTATGGCTTACCATTTTCCCGAACAGAAGATGGGAAAATATATCAACGTGCATTTGGTGGTCAAAGCTTAAATTTTGGGAAAGGAGGACAAGCATATCGTTGTGCATGTGCTGCTGATCGAACTGGTCATGCATTGTTGCACACACTCTATGGGCAAGCTATGAGGCATAATACACAATTTTTTGTGGAATATTTTGCCTTGGATCTTATCATGGATGAGGAAGGCGAATGCCAAGGAGTAATTGCAATGAACATGGAAGATGGGACTTTGCACAGATTCCGTGCTAAATCAACAATTTTAGCCACTGGGGGATATGGACGGGCATATTTCTCTGCAACTTCTGCTCATACATGTACTGGAGATGGCAATGCAATGGTTGCACGTGCTGGCCTTCCTTTGCAGGATTTTGAATTTGTGCAGTTCCATCCAACTGGTATCTATGGTGCTGGATGCTTGATCACTGAAGGATCCCGTGGTGAAGGTGGTATTCTGAGAAATAGTGAGGGTGAGCGATTTATGGAAAGATATGCTCCTACAGCTAAGGATCTTGCATCAAGGGATGTTGTCTCCAGATCTATGACGATGGAAATCCGAGAAGGTCGTGGTGTCGGACCACTGAAGGACCACATCTACCTCCACTTGAATCACTTGCCCCCAGAAGTTCTTAAGGAAAGACTTCCTGGTATCTCTGAGACAGCTGCTATTTTTGCCGGAGTTGATGTTACAAAGGAGCCCATCCCTGTCTTGCCAACTGTCCACTATAACATGGGTGGTATCCCCACGAATCACCACGGAGAGGTTGTCACCATCAGAGGTGATGATTCAGATGCTGTGGTCCCGGGATTGATGGCTGCTGGAGAGGCTGCTTGTGCGTCAGTTCATGGTGCTAATCGGCTTGGTGCAAATTCTCTTCTTGACATTGTTGTTTTTGGTCGAGCCTGCGCTAACCGAGTTGCAGAGATCAGTAAACCAGGAGGGAAGCAAAAAGCTTTGCCCAAGAATGCTGGAGAGAGGACTATTGCATGGTTGGACAAAATAAGAAATGCGAATGGTTCTCTTCCAACTTCGCAAATTCGTCTGAACATGCAGCGAGTTATGCAGAATAATGCTGCTGTCTTCCGTACACAAAGTACATTGGAGGAAGGGTGCCAATTGATTGATAAGACATGGGAGAGCTTCCACGATGTAAAATTGAAGGACCGTAGTCTAGTATGGAATTCTGACTTGATAGAAACCCTAGAGTTGGAAAATTTGTTGATCAATGCAAGCATTACTATGCACTCTGCTGAGGCTAGGAAAGAGAGCAGGGGAGCTCATGCTCGTGAAGATTTCACGACAAGAGATGATGAGAAGTGGATGAAGCACACTCTAGGATACTGGGAGAATGAGAAGGTCCGGCTAGATTATAGGCCAGTTCACATGAACACACTGGACAATGAAGTGGAATCATTCCCTCCTAAAGCTCGTGTCTACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_55525.p1 GENE.R_Transcript_55525~~R_Transcript_55525.p1 ORF type:complete len:632 (+),score=134.09,FAD_binding_2|PF00890.20|4.2e-125,Succ_DH_flav_C|PF02910.16|1.8e-44 R_Transcript_55525:139-2034(+)
MMWRCVRRGLRSHSNKFSISSHSPLSRFFSSDSNLGGSAYTVVDHTYDALVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLNFGKGGQAYRCACAADRTGHALLHTLYGQAMRHNTQFFVEYFALDLIMDEEGECQGVIAMNMEDGTLHRFRAKSTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDFEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHHGEVVTIRGDDSDAVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEISKPGGKQKALPKNAGERTIAWLDKIRNANGSLPTSQIRLNMQRVMQNNAAVFRTQSTLEEGCQLIDKTWESFHDVKLKDRSLVWNSDLIETLELENLLINASITMHSAEARKESRGAHAREDFTTRDDEKWMKHTLGYWENEKVRLDYRPVHMNTLDNEVESFPPKARVY*

Click here to download the sequence:
Link to NCBI Protein BLAST