Transcript Information: R_Transcript_55571.p1


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value1E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.117524488415
Replicate 211.154284596158
Replicate 313.600875447716
Condition 2: 8 Hour
Replicate 112.434228293523
Replicate 210.65635775244
Replicate 314.464564713121
Condition 3: 24 Hour
Replicate 115.424776731114
Replicate 214.129150226776
Replicate 314.19280850791


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_55571.p1 GENE.R_Transcript_55571~~R_Transcript_55571.p1 ORF type:complete len:128 (+),score=27.26,zf-RVT|PF13966.2|5.6e-07,zf-RVT|PF13966.2|2.6e+03 R_Transcript_55571:1446-1829(+)
ATGTGTGACCCTCTCTGTCCTCTCTGCTTACAACATCCAGAAACTCTCCACCATCTATTCTTCCACTGCCCCTCCACCAATGAGGTGTGGCAATCAATTCTTCAGTGGTTGGGTGTTGCAAAACCAATTGGACAGTGGGATGAGGAATGGAAATGGGCTGTCAAAGCTAGTAGGTTGTGTCCCCTAGAGCTAATGGCTTTTCCCTTGGGGATCTACTGTGTGTGCCTGGAAAGAAATGGCAGAGTGTTCCAGGATAAGAAGCTGAAGGATGAACAACTTATCCATCAGATCAAGTGTCGGGTGTATGCCAGGATTCAGAAAAGAGAGAAGCTGCTCAAATGGTTGGAAGGAAATAGAGGACAACCTGAGACCAACTGCCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_55571.p1 GENE.R_Transcript_55571~~R_Transcript_55571.p1 ORF type:complete len:128 (+),score=27.26,zf-RVT|PF13966.2|5.6e-07,zf-RVT|PF13966.2|2.6e+03 R_Transcript_55571:1446-1829(+)
MCDPLCPLCLQHPETLHHLFFHCPSTNEVWQSILQWLGVAKPIGQWDEEWKWAVKASRLCPLELMAFPLGIYCVCLERNGRVFQDKKLKDEQLIHQIKCRVYARIQKREKLLKWLEGNRGQPETNCL*

Click here to download the sequence:
Link to NCBI Protein BLAST