Transcript Information: R_Transcript_55575.p1


Annotated TAIR IDAT2G39100.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:16317462-16318869 | Forward length=296
E-Value1.1E-70
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4803675164949
Replicate 22.1215773939813
Replicate 32.2348036679173
Condition 2: 8 Hour
Replicate 12.6448146807129
Replicate 21.869899526789
Replicate 33.288793561882
Condition 3: 24 Hour
Replicate 13.1996943871365
Replicate 22.3822753505502
Replicate 33.0505511758742


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_55575.p1 GENE.R_Transcript_55575~~R_Transcript_55575.p1 ORF type:complete len:287 (+),score=23.49,zf-RING_2|PF13639.2|6.3e-08,zf-RING_2|PF13639.2|3.7e+03,zf-C3HC4_3|PF13920.2|1.3e-06,zf-C3HC4|PF00097.21|5.2e-06 R_Transcript_55575:172-1032(+)
ATGAAGAATCTTACAAAAGGCTCTTCTCCGTCCAAACGAATATCATTATCAGCAATAAAAGACAAAACCTGCCCTATCTGCTTATCTCAAATCACCGGCCACCGCCCTGCCCTCATCAGTTCTTGCTTACACCCCTACTGTCTTACTTGCCTTCTTCGTTGGGCCAATCACAAGCGAACTTGCCCTCTTTGTATCTCTCCCTTTGATTCGTACTTCACTACTTCTCATGTCTCTTCTAGAACTTTCCAGAAACACCGCTTGCTCCCTCTTCGACGCCCTCAACCCAACCCTCCGGTGAGGAGAAGATACAGACAAATTCATTCACCTATAGCGTTCCAAAGGATTCTTAGGAGGACAAGGGAGGAGGTTAATGTGGCCAACCGGCGGTCTAGAGAAGTGCCGCGTCAGCGATCATTTGGTCGGTTGGGGTCTGTGCCTTCTCAGGTTATTGCTGAAAGGGTTCTACAATGGCGTGCCAGCATTTATCGACATGGTTTGCAGGCTGTTCCCTTCTCTAACAACAATTTTCCGATCTTGAGCGGGACACTAAGTAATGGTAATAGAGACAGTATACTGCAAAGAATAGAACCATGGATCCGAAGAGAATTGCAAGCTGTACTTCAAGATCCAGACCCAGCTGTTATTGTGCATGTCGTTACATCATTATATTTCTCCAGCATTGAGAAGAAGCTTAGAGCTTCTTCAAGATGCCCTGATGTTGAAGACTCTTTCCTTGCCCCGTTACGGCCATTTTTGCATGAATGGACAAATAAGTTTTGGCATGAGCTTAGGTGCTTTGCAGAGAGTATTTTTACCATTAATACCTATGATGAGATGGTTGAATATAGCATATTAGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_55575.p1 GENE.R_Transcript_55575~~R_Transcript_55575.p1 ORF type:complete len:287 (+),score=23.49,zf-RING_2|PF13639.2|6.3e-08,zf-RING_2|PF13639.2|3.7e+03,zf-C3HC4_3|PF13920.2|1.3e-06,zf-C3HC4|PF00097.21|5.2e-06 R_Transcript_55575:172-1032(+)
MKNLTKGSSPSKRISLSAIKDKTCPICLSQITGHRPALISSCLHPYCLTCLLRWANHKRTCPLCISPFDSYFTTSHVSSRTFQKHRLLPLRRPQPNPPVRRRYRQIHSPIAFQRILRRTREEVNVANRRSREVPRQRSFGRLGSVPSQVIAERVLQWRASIYRHGLQAVPFSNNNFPILSGTLSNGNRDSILQRIEPWIRRELQAVLQDPDPAVIVHVVTSLYFSSIEKKLRASSRCPDVEDSFLAPLRPFLHEWTNKFWHELRCFAESIFTINTYDEMVEYSILD*

Click here to download the sequence:
Link to NCBI Protein BLAST