Transcript Information: R_Transcript_55577.p1


Annotated TAIR IDAT1G72220.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:27184388-27185629 | Reverse length=413
E-Value2.5E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.576735291971
Replicate 212.93064842711
Replicate 314.526223841462
Condition 2: 8 Hour
Replicate 110.749891928059
Replicate 212.134868804058
Replicate 38.8544442050668
Condition 3: 24 Hour
Replicate 113.158743167099
Replicate 29.0103801565163
Replicate 310.410005887671


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_55577.p1 GENE.R_Transcript_55577~~R_Transcript_55577.p1 ORF type:complete len:164 (+),score=29.68,zf-RING_2|PF13639.2|8.4e-13,zf-RING_11|PF17123.1|1.8e-08,zf-rbx1|PF12678.3|6.1e-07 R_Transcript_55577:280-771(+)
ATGATGTCACCATTGAGTTTCTTGGTGATGCTGTTAATAATGATCGTAATACCCACAATTCTATACGGTTTATTCTTCCTCATCAACTGCCCTCCAACCCCTTTTCAGTTCCGACGTCGCCGGTCATCCGAGACCGGCGACGAGGGCTCGAAAAAGGGGGAGAAGAAAGAAAAAGAGACCAAAAATGGTGACATAGAGCTTGTGGTAACAGTGAGCTCAGAGTTAGGAAAAGATGCAGAGTGCCCTGTTTGTCTCTCTGCTTTTGTAGAGGGTGAAGAGTTAAAGCAGCTGAAGATCTGCAAGCATGTGTTCCACAAATCATGTATTGACAAGTGGCTTTCTTGTCATTGTAATTGCCCTCTTTGCAGGGCTTTTGTTTCCACTGATTTTAAGGCTAAGGAAAAAAGAGATAACCATCGTTTGTTGGGGAGAGATGTTGGTGGGAGAGATGATCATTGGCAAGGTTTGCCTGATTCAGCCGGCTTGATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_55577.p1 GENE.R_Transcript_55577~~R_Transcript_55577.p1 ORF type:complete len:164 (+),score=29.68,zf-RING_2|PF13639.2|8.4e-13,zf-RING_11|PF17123.1|1.8e-08,zf-rbx1|PF12678.3|6.1e-07 R_Transcript_55577:280-771(+)
MMSPLSFLVMLLIMIVIPTILYGLFFLINCPPTPFQFRRRRSSETGDEGSKKGEKKEKETKNGDIELVVTVSSELGKDAECPVCLSAFVEGEELKQLKICKHVFHKSCIDKWLSCHCNCPLCRAFVSTDFKAKEKRDNHRLLGRDVGGRDDHWQGLPDSAGLI*

Click here to download the sequence:
Link to NCBI Protein BLAST