Transcript Information: R_Transcript_55680.p1


Annotated TAIR IDAT2G44950.1
Annotated Gene Namehistone mono-ubiquitination 1
Annotated Gene Symbol(s)RDO4, HUB1
Annotation TypeOrtholog
Chromosome Positionchr2:18542602-18548247 | Reverse length=878
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.44218022894
Replicate 212.602563006138
Replicate 314.218874703762
Condition 2: 8 Hour
Replicate 114.390326096559
Replicate 216.859799292557
Replicate 319.309344327382
Condition 3: 24 Hour
Replicate 116.211663418197
Replicate 212.660421959967
Replicate 315.680371580932


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_55680.p1 GENE.R_Transcript_55680~~R_Transcript_55680.p1 ORF type:complete len:878 (+),score=204.08,zf-C3HC4_3|PF13920.2|6.3e+03,zf-C3HC4_3|PF13920.2|1.2e-09,zf-C3HC4|PF00097.21|1.9e+03,zf-C3HC4|PF00097.21|6.5e-08,zf-C3HC4_2|PF13923.2|5.7e-06,zf-RING_5|PF14634.2|6.1e-06 R_Transcript_55680:420-3053(+)
ATGGGGAGTACAGGAGAAGCTGACCGTAAACGTCGTCACTTAAGCTCTATCTCTCCTACTGCTATGGCCAAAAAGCAGCCTATCTCTCCCCTCTCTGAGGACAAAAAGCTTGATACTGCAGTACTTCAGTTTCAAAATCAGAAGCTGTCTCAGAAGCTAGAAGCCCAGAAGATTGAAATTTCGGGCCTGGAGAGAAAGTTGTCACGCCGTAAAGAGAAGCAACAGCCTTATGATAAAGTGCTCGTTGCAGTTAATGATGGCTGGTATAAGCTCGTTGATGACTTGGAAGCACGATCAGCCCACACCAGACGCTTGGTTAGCAGTGGAGAAAATACTCGACATTCGTTCATTATAGAGGATAATGCTTCGTGTTCCTCGGATGATACATTTTTGAAGCGACTTATGGAAACAAGTTCTTCAGAAACCTGCCTAGCCAGTAATTCGCTTGATGAAATGATAGAAGATGGAGATAAAGCCTGTGAAAAGTCGCAAAATATTTTGTGCAATATAGTGGCTGCTGTTGATGACTTATGGCGTATGAAAGATGGATTATATGCTGCTGTTTTGATGGCACTTCCAGAACATGGTTCCTGTAGGCAGAAGGCATCCTATGAAATCGAAGCAGAAGTTAAGAAGTTACGGTCAACTCTTAGTGATCTTTACTTGAAACACAAATCACTTGCTAGGGAACTGAGAAAGCAGCAGGATAGTGATGTAAAGAACAAAGCTGAGCTGAAATACATGCGAGGGGAACTGGAGAGTACCATTAGAGAACTTGAAGACAGTAATAGTAATTTGGCAGCCCTAAAAGCGGAGAAAGATGCGACAAAGGGGACATTTTTTCCTGTGTTAAACATGGGAAATAAGCATATTGCTAACGATAGGACAGGAGATAAGCAAAAAGAACTGCAAGATATGGAGTTAGCTTTGAAGGAGTCAATGGAACAATCCTCTTCTCGGCTGCAAGAACTCAAGCGGCTTCATGAGGAAAGGATAGAAATTTTAAAGAAGCTGTCTAATTTGCAGGGCACATTGAAGAACCTGAAATGTATATCTTCTTCTGGAACCTTCAAGTTGGTAAAAGAAGAACTTGAGAAGTCTAAAGCTGACTTCTTCCAGTATCAAGCCTTATATGAAAAACTTCAGGTTGAGAAAGATAAATTGTTGTGGAAGGAAAAAGAAGTTAGTATAAGAAATGATTTAGGTGATGTATTCCGGAGAACTTCAAATTCCGCTCATTCCAGAATAGCTGATCTCGAAACAGAGATACAGAGACAAGTTGATGAAAGGAAGCGGATAGAAGCAAAGCTAGAAGCTGCATCTAGGGAGCCAGGAAGAAAAGAAATAATATCAAACTTTAAAGAGTTTGTTTCTTCCTTTCCGGAGGACATGAGCTCAATGCAAAGTAAGTTACGAAAGTACAAGGAGACGGCTTCTGATGTCCATTCGTTGCGGGCTGAGGTGCAATCCCTTTCAAATATTCTTTCCAGGATGACCAAAGAATTGGAAACATTATCTTGTCGATCCTCAAATCAAGATGCTGAATTAAAGAGGCTGCAAGCTGTGGTTCAGGATCTGAAAGAGGGTGATGCAGAATTAAAACTCATTCTGGATATGTATAGACGTGAATCCACCATCCCAAGGAATTTCTTGGAGTCGAGAGATAGGGAATACAGGGCATGGGCTCATGTGCATAGTCTGAAGTCTTCCCTTGATGAGCATAATATGGAACTACGTGTTAAGACGGCTATTGAAGCAGAGGCAATATCCCAGCAACGGCTAGCTGCTGCAGAAGCTGAAATTGCAGACTTGAGGGAGAAATGCGAATCTTCTGAAAGGGATAAATCAAAGCTTTCTAATGACCTGAAATCTAAGCATGAAGAAAATGAGGCCTACTTATCAGAGATTGAGACTATTGGGCAGGCCTATGATGACATGCAAAATCAAAATCAGCATCTTTTGCAGCAAATCACAGAGAGAGATGACTATAACATTAAGCTTGTGCTGGAGGGTCTGAGGGGTAGACAGACCCATGATGTTCTACTCATGGAGAAACGAGCTTTGGAGAAGAAGATTCAGCAGGCAAATGTTTCACGAGAATTTTTTGAAATAAAAACTGCGCGGATCGAGGATCAGGTGAAAAGCTGCTCAGACCAGATCCATAAACTTGCTGAAGATAGATGTCAGCACTCAGTCGCCCTAGAAAACACCCAAAGGAGAACATTGGAAGCAAGGAAAAGTTCGCAGCAGGCCAGAGAATCTCTTGAAGAATTACAATGTAAGGTCAAGAATAGTCGGGTGAATCTTTCAGATTTGCAGATAGAGTTAGAGAAGGAAAGGTTTGGGAGGAAGCGACTGGAAGAGGAACTGGAGGTCGTAAAAAGAAAAGCTGAACGTCTCAGAGTACAAAACGAGGGTTCGGTTGTTGGAAAGCTCCGTCAGGAACTCCAAGAGTACAAGGAAATACTTAAGTGTAGTGTTTGCGTTGACAGGCCAAAAGAGGTTGTCATCACAAAATGCTATCATCTATTGTGCAATCCTTGTGTTCAGAAAGTAATTGAATCCCGCCACCGCAAGTGTCCTGTGTGTGCTGCAAGTTTTGGGCCTAATGACGTTAAGCCAGTTTACATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_55680.p1 GENE.R_Transcript_55680~~R_Transcript_55680.p1 ORF type:complete len:878 (+),score=204.08,zf-C3HC4_3|PF13920.2|6.3e+03,zf-C3HC4_3|PF13920.2|1.2e-09,zf-C3HC4|PF00097.21|1.9e+03,zf-C3HC4|PF00097.21|6.5e-08,zf-C3HC4_2|PF13923.2|5.7e-06,zf-RING_5|PF14634.2|6.1e-06 R_Transcript_55680:420-3053(+)
MGSTGEADRKRRHLSSISPTAMAKKQPISPLSEDKKLDTAVLQFQNQKLSQKLEAQKIEISGLERKLSRRKEKQQPYDKVLVAVNDGWYKLVDDLEARSAHTRRLVSSGENTRHSFIIEDNASCSSDDTFLKRLMETSSSETCLASNSLDEMIEDGDKACEKSQNILCNIVAAVDDLWRMKDGLYAAVLMALPEHGSCRQKASYEIEAEVKKLRSTLSDLYLKHKSLARELRKQQDSDVKNKAELKYMRGELESTIRELEDSNSNLAALKAEKDATKGTFFPVLNMGNKHIANDRTGDKQKELQDMELALKESMEQSSSRLQELKRLHEERIEILKKLSNLQGTLKNLKCISSSGTFKLVKEELEKSKADFFQYQALYEKLQVEKDKLLWKEKEVSIRNDLGDVFRRTSNSAHSRIADLETEIQRQVDERKRIEAKLEAASREPGRKEIISNFKEFVSSFPEDMSSMQSKLRKYKETASDVHSLRAEVQSLSNILSRMTKELETLSCRSSNQDAELKRLQAVVQDLKEGDAELKLILDMYRRESTIPRNFLESRDREYRAWAHVHSLKSSLDEHNMELRVKTAIEAEAISQQRLAAAEAEIADLREKCESSERDKSKLSNDLKSKHEENEAYLSEIETIGQAYDDMQNQNQHLLQQITERDDYNIKLVLEGLRGRQTHDVLLMEKRALEKKIQQANVSREFFEIKTARIEDQVKSCSDQIHKLAEDRCQHSVALENTQRRTLEARKSSQQARESLEELQCKVKNSRVNLSDLQIELEKERFGRKRLEEELEVVKRKAERLRVQNEGSVVGKLRQELQEYKEILKCSVCVDRPKEVVITKCYHLLCNPCVQKVIESRHRKCPVCAASFGPNDVKPVYI*

Click here to download the sequence:
Link to NCBI Protein BLAST