Transcript Information: R_Transcript_55764.p1


Annotated TAIR IDAT1G02170.1
Annotated Gene Namemetacaspase 1
Annotated Gene Symbol(s)LOL3, ATMCPB1, MCP1B, ATMC1, MC1
Annotation TypeOrtholog
Chromosome Positionchr1:411883-413426 | Forward length=367
E-Value2.9E-190
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.132654481619
Replicate 218.242687246948
Replicate 321.029136153845
Condition 2: 8 Hour
Replicate 122.612629377511
Replicate 234.824324178896
Replicate 339.626057064725
Condition 3: 24 Hour
Replicate 122.957807227704
Replicate 216.089492141487
Replicate 321.648494799609


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_55764.p1 GENE.R_Transcript_55764~~R_Transcript_55764.p1 ORF type:complete len:366 (+),score=61.96,Peptidase_C14|PF00656.18|1e-62,zf-LSD1|PF06943.8|9.8e-11 R_Transcript_55764:237-1334(+)
ATGCTATTAGTGGACTGCTCAAACTGCAAGACCCCATTACAGCTCCCTCCTGGAGCCACCTCTATCCGCTGTGCCATCTGTCGTGCCGTCACTAGTATCGCCGATCCTCGCTCTTCTCCTCCTCCACCTTTCTCTTATTACCCTCCACCACCCCCACCACCCCACCACCACCACCCACCTCCGCCTTATTATGCTGGAGCCCCGTCTCGACAACCACCATCCCCACCACTACATACCGCCCGTAAGAAGGCTGTGATTTGTGGGATCTCTTACAAGAACACCAGGTTTGAACTTAAGGGTTGTATCAATGATGCCAAGTGTATGAAATTCTTGCTTATCAATAAGTTCCATTTTCCTGAATCAGAGATTCTCATGCTTACTGAAGAAGAGCGTGATCCTTACAGAATTCCCACCAAGCACAATATCAGAATGGCAATGGCTTGGCTCGTAGCAGGATGTAGAGCAGGGGATTCCTTAGTGTTTCTCTACTCAGGACACGGTTCACAACAAAGAGACTACAGTGGAGAAGAAGCAGATGGCTTTGATGAAACCCTCTGCCCCTTGGACTTTCAGACAAACGGAATGATAGTAGATGATGAGATTAACGACACTATTGTTAAGCCCCTCCCCCCTGGTGTTAAGCTTCATGCAATCATAGACGCTTGCCATAGTGGAACTGTGTTGGACCTGCCGTTTCTTTGCAGAATGAACAGGAGTGGACAGTATGTGTGGGAGGATCATCGCCCTAGATCTGGTCGATGGAAAGGTACTAGCGGTGGCGAGGTAATTTCCTTTAGTGGCTGTGATGATGATCAAACATCTGCTGATACATCGGCTCTATCAAAGGTGACTTCAACTGGTGCAATGACTTATTGTTTTATCCAAGCAGTCGAGCGAGGACAAGCAACTACTTATGGAAGCATGCTCAATGCTATGCGTGCAGCCATTCGCAATACTGAGCCTCAACTTGGGGGTGGTGTCATGACATCTCTCGTTACCATGCTTTTGACTGGAGGAAGTGGTGTCGGGTTGAGACAGGAACCGCAGTTGACTGCAAACGAACCATTTGATGTTTATGCAAAGCCTTTTTCTCTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_55764.p1 GENE.R_Transcript_55764~~R_Transcript_55764.p1 ORF type:complete len:366 (+),score=61.96,Peptidase_C14|PF00656.18|1e-62,zf-LSD1|PF06943.8|9.8e-11 R_Transcript_55764:237-1334(+)
MLLVDCSNCKTPLQLPPGATSIRCAICRAVTSIADPRSSPPPPFSYYPPPPPPPHHHHPPPPYYAGAPSRQPPSPPLHTARKKAVICGISYKNTRFELKGCINDAKCMKFLLINKFHFPESEILMLTEEERDPYRIPTKHNIRMAMAWLVAGCRAGDSLVFLYSGHGSQQRDYSGEEADGFDETLCPLDFQTNGMIVDDEINDTIVKPLPPGVKLHAIIDACHSGTVLDLPFLCRMNRSGQYVWEDHRPRSGRWKGTSGGEVISFSGCDDDQTSADTSALSKVTSTGAMTYCFIQAVERGQATTYGSMLNAMRAAIRNTEPQLGGGVMTSLVTMLLTGGSGVGLRQEPQLTANEPFDVYAKPFSL*

Click here to download the sequence:
Link to NCBI Protein BLAST