Transcript Information: R_Transcript_55765.p1


Annotated TAIR IDAT1G02170.1
Annotated Gene Namemetacaspase 1
Annotated Gene Symbol(s)LOL3, ATMCPB1, MCP1B, ATMC1, MC1
Annotation TypeOrtholog
Chromosome Positionchr1:411883-413426 | Forward length=367
E-Value2.8E-111
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.781480845386
Replicate 27.4104589704581
Replicate 38.7066332944652
Condition 2: 8 Hour
Replicate 14.7642180666586
Replicate 210.118046081984
Replicate 310.266748088454
Condition 3: 24 Hour
Replicate 17.2717036467841
Replicate 25.4888653347591
Replicate 38.3193085687754


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_55765.p1 GENE.R_Transcript_55765~~R_Transcript_55765.p1 ORF type:complete len:221 (+),score=36.55,Peptidase_C14|PF00656.18|1.6e-30 R_Transcript_55765:48-665(+)
ATGGCAATGGCTTGGCTCGTAGCAGGATGTAGAGCAGGGGATTCCTTAGTGTTTCTCTACTCAGGACACGGTTCACAACAAAGAGACTACAGTGGAGAAGAAGCAGATGGCTTTGATGAAACCCTCTGCCCCTTGGACTTTCAGACAAACGGAATGATAGTAGATGATGAGATTAACGACACTATTGTTAAGCCCCTCCCCCCTGGTGTTAAGCTTCATGCAATCATAGACGCTTGCCATAGTGGAACTGTGTTGGACCTGCCGTTTCTTTGCAGAATGAACAGGAGTGGACAGTATGTGTGGGAGGATCATCGCCCTAGATCTGGTCGATGGAAAGGTACTAGCGGTGGCGAGGCTCTATCAAAGGTGACTTCAACTGGTGCAATGACTTATTGTTTTATCCAAGCAGTCGAGCGAGGACAAGCAACTACTTATGGAAGCATGCTCAATGCTATGCGTGCAGCCATTCGCAATACTGAGCCTCAACTTGGGGGTGGTGTCATGACATCTCTCGTTACCATGCTTTTGACTGGAGGAAGTGGTGTCGGGTTGAGACAGGAACCGCAGTTGACTGCAAACGAACCATTTGATGTTTATGCAAAGCCTTTTTCTCTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_55765.p1 GENE.R_Transcript_55765~~R_Transcript_55765.p1 ORF type:complete len:221 (+),score=36.55,Peptidase_C14|PF00656.18|1.6e-30 R_Transcript_55765:48-665(+)
MAMAWLVAGCRAGDSLVFLYSGHGSQQRDYSGEEADGFDETLCPLDFQTNGMIVDDEINDTIVKPLPPGVKLHAIIDACHSGTVLDLPFLCRMNRSGQYVWEDHRPRSGRWKGTSGGEALSKVTSTGAMTYCFIQAVERGQATTYGSMLNAMRAAIRNTEPQLGGGVMTSLVTMLLTGGSGVGLRQEPQLTANEPFDVYAKPFSL*

Click here to download the sequence:
Link to NCBI Protein BLAST