Transcript Information: R_Transcript_55823.p1


Annotated TAIR IDAT1G67170.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14750.1); Has 5478 Blast hits to 4354 proteins in 533 species: Archae - 87; Bacteria - 653; Metazoa - 2554; Fungi - 380; Plants - 418; Viruses - 16; Other Eukaryotes - 1370 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:25127727-25129145 | Forward length=359
E-Value6.4E-97
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 131.50047076103
Replicate 219.178064091588
Replicate 326.260095058682
Condition 2: 8 Hour
Replicate 128.827688422427
Replicate 234.117634149438
Replicate 339.409579346943
Condition 3: 24 Hour
Replicate 139.714639719678
Replicate 230.559039122614
Replicate 339.036834132301


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_55823.p1 GENE.R_Transcript_55823~~R_Transcript_55823.p1 ORF type:5prime_partial len:485 (+),score=117.41 R_Transcript_55823:1-1455(+)
CCAAAAGTGAAAAAAAAAAAAAAAAAAAAAGAGCAGGAGCACATCCTGTCTCTCGAGTCTCAATCCCAGCTCTTTCTAAGGCAAGGGTTTGACAGCGTCGCCGGTCTAGGTTTAGTCGGTCAAATCAAGGGTTTTTTCCGGCGAACAACAACAATAAGAAAGGTTCAAATGGGAAGCAAAGGTCGAATTCCTCCTCCTCATATGAGACGCCCTCTTCCTGGCCCTGGTGTAGTGCACCCTGAGCCATTTGGTGTTGGAATACGGCCCCCGCATGGTGGCTTCCCTCCCATTGACATGTTACCACCACCAGAAATCATGGAGCAGAAACTTGCTGCTCAACACATGGAGATGGAAAGGTTGGCAACAGAGAACCGGAGGCTTGCTGCCACCCATGGAACACTGAGACAACAGCTTGCCGCAGCCCAGCAGGAGCTGCAGATGCTAGAATCTCAAATTGGAGCTGTAAAGTCCGACAAAGAGCAACAGATGAGGGGCCTCATAGAAAGGATTTCAAAAATGGAAGCTGAATTGCAAGCAGCAGAGCGTATTAAACTGGAGTTGCAACAGGCACGGACAGAGGCTCAGAGTTTGGCTGAAGTGAGGCAAGAACTTATAACCAAAGCGCAACAAATGAATAATGACCTCCAGAGGGCCCATGTAGATGTGCAGCAAATACCTACGCTGTTGTCTGAACTTAATCACCTCAGACAGGAGTTTCATCAGTGCAGGGCTACATATGAGCATGAAAGGAAAGTTTACCTTGACCATATTGAATCCCTTCAAGTTATGGATAAGGAGTATAGGACCATGGCAGATGAGGTGGCAAATCTTCGTGCTGAATTGAATAATACTGCTAATGTTGATAAAAGAGCTGCCTATGGTGGAGCCACTGGATACAGTGAGAATGATCCTTCTGTGCACACTACGTCAGGGCAAAACTCTTATGAAGATGGTTTTGGAGTGTCACAGGTACATGGCACGTTTCCCACAAGCGGTGCTGCTGCAACTGCGCCCGTTCCTGCTAGTGGTGGTACTCCAACTTATGGTGCTCCTCAATCAGGTCTAGCTGCTGCTAGAGGTAGCTATGATGCATCGAGGGCCTCGGGCTATGAGGCCAAACGAGGTCCCACTTATGAAGCATCAAGGGGTCCTGCCTATGACCCACAGGGAGTTCAGGGCTACAGTACTCAGAAAGTACCAGGTTATGATCCATATAGAGCAGGTGGTTATGACATGCAGAGGGCTGTACCTTATGATCCACAAAGAGCCGGAGGTTATGAAATGCCTCGGTCGGTTAACTATGATACACAATCAAGGGGTGTAGCTCCTCCCCCTCCAAGCCAGGCACCTGCAAGCAACATGCCATATGTGTCTGCAGTGCTACCTGCTGCTCGAGCTGGAGCAGCTCCAGGTCACGAAGCAAATACACGAGGTGGCAACACAGCTCGCAGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_55823.p1 GENE.R_Transcript_55823~~R_Transcript_55823.p1 ORF type:5prime_partial len:485 (+),score=117.41 R_Transcript_55823:1-1455(+)
PKVKKKKKKKEQEHILSLESQSQLFLRQGFDSVAGLGLVGQIKGFFRRTTTIRKVQMGSKGRIPPPHMRRPLPGPGVVHPEPFGVGIRPPHGGFPPIDMLPPPEIMEQKLAAQHMEMERLATENRRLAATHGTLRQQLAAAQQELQMLESQIGAVKSDKEQQMRGLIERISKMEAELQAAERIKLELQQARTEAQSLAEVRQELITKAQQMNNDLQRAHVDVQQIPTLLSELNHLRQEFHQCRATYEHERKVYLDHIESLQVMDKEYRTMADEVANLRAELNNTANVDKRAAYGGATGYSENDPSVHTTSGQNSYEDGFGVSQVHGTFPTSGAAATAPVPASGGTPTYGAPQSGLAAARGSYDASRASGYEAKRGPTYEASRGPAYDPQGVQGYSTQKVPGYDPYRAGGYDMQRAVPYDPQRAGGYEMPRSVNYDTQSRGVAPPPPSQAPASNMPYVSAVLPAARAGAAPGHEANTRGGNTARR*

Click here to download the sequence:
Link to NCBI Protein BLAST