Transcript Information: R_Transcript_55848.p1


Annotated TAIR IDAT4G33890.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G14850.1); Has 133 Blast hits to 131 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 129; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:16250057-16251085 | Forward length=342
E-Value2E-89
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.014859475257
Replicate 29.6685961045078
Replicate 312.920148998375
Condition 2: 8 Hour
Replicate 19.8076897745097
Replicate 211.576478337399
Replicate 313.947559114303
Condition 3: 24 Hour
Replicate 114.387726600469
Replicate 210.276428529397
Replicate 314.015287742291


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_55848.p1 GENE.R_Transcript_55848~~R_Transcript_55848.p1 ORF type:complete len:367 (+),score=71.71,SAGA-Tad1|PF12767.3|1.6e-53 R_Transcript_55848:768-1868(+)
ATGGTGGTGAGGGATCTGGAAATCAAAATGCCGGTTGATCGGCATTTTACTAGAATTGACATATTAGAGATCAAGATTCAGATAGGAAAGAAGCTAGGAAATCAGAAAGCAGAGAAGTACTTTGGTTTGCTAGATAGGTTTTTTAATCTTAAGCTCGGTAAGTCAGAATTCAATAAACTATGCATTGCTACTATTGGGCGGGAAAACATTGGCTTGCACAACTGCCTTATCAGGTCGATTCTAATGAATGGATGCCTCTCCAAGGTACCGCCTCCGAAGGTTAATAAGTTGGAGAGACCTGCAATCGATAAAGTTGCTAATGGCTATCAAAGAAGTTGCCTTCAATCTCTTTGTAGAGATGTGCTTCCGCAGTCCCCTCGTAGAGGTAGGACCCCAGGTTTTCGTGATCGCAAAAGTAAGGATCGTCCGAGCCCACTTGGCCCACATGGGAAACCGAATGCTGTTGTGGGTAAAGAGGTGGGGCAAAAAGCTTTAGAGCAGCAAAGTGCTACGGAGCTACTATCTTTGGGTAGTAGGCCGGTGGAAGTCAATTCTGTGGAAGATGGGGAAGAGGTTGATCAGGCTGCTATTAGCCCGGGGATTCACAGCAGGAGTCCGGTTACTCCTCCTCTTGGAGTTCCTTGGAATGGAAAAGGGAATCGGAAAGTGCTTAGTGCTTTATTGTCTTCTTCAGTTCAGGAAACTTGTCAAGGCAGTGGCGAGTTACCTGACACTAGCTCTTTGAGAAAGAGATTGGAACAGAAGTTGGAGAGTGAAGGCTTAAGTGTCTCACTGGATTGTGTGAATCTGCTGAACAGTGGCTTGGATGTTTATTTGAAGAGGTTGATAAAGCCGCCTCTAGAACTAGCTAGCTCAAGGCTTGGAAGCAAACAACGAAATCAGACGAGTAATCAGGCTGTGCCTGGACTGAATGGCGTGTGGCCTATGAGGTATTTACAAAGGCCACCTGTTCCTGTTTCTGCATCCATGTTGGACTTTCGAACTGCAATGGAGTTGAATCCGCAAATACTGGGAGAGGATTGGCCAATGCAACTTGAAAAGGTGTGCCTTCGAGAGTCTGAAGATTGGTATAGAAGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_55848.p1 GENE.R_Transcript_55848~~R_Transcript_55848.p1 ORF type:complete len:367 (+),score=71.71,SAGA-Tad1|PF12767.3|1.6e-53 R_Transcript_55848:768-1868(+)
MVVRDLEIKMPVDRHFTRIDILEIKIQIGKKLGNQKAEKYFGLLDRFFNLKLGKSEFNKLCIATIGRENIGLHNCLIRSILMNGCLSKVPPPKVNKLERPAIDKVANGYQRSCLQSLCRDVLPQSPRRGRTPGFRDRKSKDRPSPLGPHGKPNAVVGKEVGQKALEQQSATELLSLGSRPVEVNSVEDGEEVDQAAISPGIHSRSPVTPPLGVPWNGKGNRKVLSALLSSSVQETCQGSGELPDTSSLRKRLEQKLESEGLSVSLDCVNLLNSGLDVYLKRLIKPPLELASSRLGSKQRNQTSNQAVPGLNGVWPMRYLQRPPVPVSASMLDFRTAMELNPQILGEDWPMQLEKVCLRESEDWYRS*

Click here to download the sequence:
Link to NCBI Protein BLAST