Transcript Information: R_Transcript_5589.p1


Annotated TAIR IDAT5G04200.1
Annotated Gene Namemetacaspase 9
Annotated Gene Symbol(s)AtMC9, MC9
Annotation TypeHomolog
Chromosome Positionchr5:1153893-1154870 | Forward length=325
E-Value8E-78
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 163.739572918555
Replicate 251.518078976731
Replicate 361.694504132768
Condition 2: 8 Hour
Replicate 121.356680928428
Replicate 225.504264592023
Replicate 325.690618226299
Condition 3: 24 Hour
Replicate 127.872098231717
Replicate 230.229092856414
Replicate 326.852647283606


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_5589.p1 GENE.R_Transcript_5589~~R_Transcript_5589.p1 ORF type:complete len:313 (+),score=43.59,Peptidase_C14|PF00656.18|3.2e-49 R_Transcript_5589:191-1129(+)
ATGGAAAAGGGGAAAAAGAGGCTGGCTGTGCTAGTAGGATGTAACTATCCAAACACCCCAATAGAGCTCAAGGGTTGTATCAATGATGTGGAGTCCATGAAGGAGCTGCTGATCGAGCAGTTCGGGTTCGATCCATATCATGTTGTGGTCTTGACTGATGAACCAGGCTCTGGCTTGCTATCAACAGGAGCCAACATTAAGGCAGCACTTAACAGGATGGTCAGCATAGCTGAACCAGGGGATGTCCTCTTTTTCTACTTTAGTGGGTATGGGACATGGTTTCCTAGTCCTATGGACCCCTCTAAATTGGATGAAGCTATTGTGCCTTGTGATTTCAACCTTGTCACTGATGAGGATTTTACAAAACTAGTCAACCGGCTCCCAACAGGAGCAAGTTTCACCATCTTATCAGATTCCAGCCATACTGGTGGCCTTGTAGACAAGGAGAACGCGCAAATCGAACCTAGCTCCGCTACCCAACCCTCAAAGCATCACAACCACAACCACAAGGTCATCTCGAATGAGTCCCTCCTAGCCCATCTAGCTTCTCTCACAAACCTTGAGGGCTCGGACCTTGGGGCCCACTTGACCACCCTCTTTGGTTCCAATGCTAGCCCCAAGTTCCAAATAGGCTCAAACAAGATTGACATGCTAAGCTCAGCCTATTCAGACTCAGGCATCCTCCTAAGAGGATGCCAACCCAATGGAAGCTCCGCGGACCTGGCCCCTACTAGCACGGACCAGGCCCATGGAGCGTTCACCCTTGCGTTGTGCACGCTATTTAAGGCATACCCAGGCCCGCTATCGAACAAGCAGGTGGTGATGCTTGCCAGGCAGATGTTGAATGAGGAGATGGGAATTGAGCAACAGCACCCTTGTTTGTATTCCAGTGACCAGAATATCAATGCCCCATTCCTCTGGCAGCCTGATGAAGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_5589.p1 GENE.R_Transcript_5589~~R_Transcript_5589.p1 ORF type:complete len:313 (+),score=43.59,Peptidase_C14|PF00656.18|3.2e-49 R_Transcript_5589:191-1129(+)
MEKGKKRLAVLVGCNYPNTPIELKGCINDVESMKELLIEQFGFDPYHVVVLTDEPGSGLLSTGANIKAALNRMVSIAEPGDVLFFYFSGYGTWFPSPMDPSKLDEAIVPCDFNLVTDEDFTKLVNRLPTGASFTILSDSSHTGGLVDKENAQIEPSSATQPSKHHNHNHKVISNESLLAHLASLTNLEGSDLGAHLTTLFGSNASPKFQIGSNKIDMLSSAYSDSGILLRGCQPNGSSADLAPTSTDQAHGAFTLALCTLFKAYPGPLSNKQVVMLARQMLNEEMGIEQQHPCLYSSDQNINAPFLWQPDED*

Click here to download the sequence:
Link to NCBI Protein BLAST