Transcript Information: R_Transcript_5590.p1


Annotated TAIR IDAT5G04200.1
Annotated Gene Namemetacaspase 9
Annotated Gene Symbol(s)AtMC9, MC9
Annotation TypeHomolog
Chromosome Positionchr5:1153893-1154870 | Forward length=325
E-Value4E-82
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.77893196701
Replicate 214.110053977512
Replicate 314.510055647724
Condition 2: 8 Hour
Replicate 19.762852905011
Replicate 211.144490949787
Replicate 311.206139032522
Condition 3: 24 Hour
Replicate 17.4557509003155
Replicate 212.268680990578
Replicate 310.556770749307


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_5590.p1 GENE.R_Transcript_5590~~R_Transcript_5590.p1 ORF type:complete len:311 (+),score=46.72,Peptidase_C14|PF00656.18|7.4e-49 R_Transcript_5590:191-1123(+)
ATGGAAATGGGGAAGAAGAGATTGGCTGTGCTAGTAGGATGTAACTATCCAAACACCCCAATAGAGCTCAAGGGTTGTATCAATGATGTGGAGTCCATAAAGGAGCTGCTGCTCGAGCGGTTCGGGTTCGATTCATATCATGTTGTGGTCTTGACTGATGAACCAGGCTCTGGCTTGCTATCAACAGGAGCCAACATTAAGGCAGCACTTAACAGGATGGTCAGCATAGCTGAACCAGGGGATGTCCTCTTTTTCTACTTTAGTGGGTATGGGACATGGTTTCCTAGTCCTATGGACCCCTCTAAATTGGATGAAGCTATTGTGCCTTGTGATTTCAACCTTATCACTGATGTTGATTTTACACAATTAGTCAACCGGCTCCCAAAAGGAGCAAGTTTCACCATCTTATCAGATTCCAGCCATACTGGTGGCCTTGTAGACAAGGAGAAGACACAAATCGAACCTAGTTCTACGGCCGAACCCTCAAAGCACCACAACCACAAGGTCATCTCCAATGAGTCCCTCCTAGCCCATCTAGCATCTCTTACAAACCTTGAGGGCTCAGACCTTGGGGGCCACTTGACCACACTCTTTGGTTCCAATGCTAGCCCCAAGTTCCAAATAGGGCCTAACAAGATTGAAAGGCTAAGCTCAGCCTATTTAGACTCAGGCATCCTTCTAAGCGGATGCCAACCCAATGGGAGCTCCGTGGACCTAGCCCCTACTAGCACGGACCAAGCCCATGGAGCGTTCACCCTTGCGTTGTGCACGCTATTTAAGGCATACCCAGGCCCGCTATCGAACAAGCAGGTGGTGATGCTTGCCAGGCAGATGTTGAATGAGGAGATGGGCATTGAGCAACAGCACCCTTGCTTGTATTGCAGTGACCAGAATATCAATGCCCCATTCCTCTGGCAGCCTGATGAAGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_5590.p1 GENE.R_Transcript_5590~~R_Transcript_5590.p1 ORF type:complete len:311 (+),score=46.72,Peptidase_C14|PF00656.18|7.4e-49 R_Transcript_5590:191-1123(+)
MEMGKKRLAVLVGCNYPNTPIELKGCINDVESIKELLLERFGFDSYHVVVLTDEPGSGLLSTGANIKAALNRMVSIAEPGDVLFFYFSGYGTWFPSPMDPSKLDEAIVPCDFNLITDVDFTQLVNRLPKGASFTILSDSSHTGGLVDKEKTQIEPSSTAEPSKHHNHKVISNESLLAHLASLTNLEGSDLGGHLTTLFGSNASPKFQIGPNKIERLSSAYLDSGILLSGCQPNGSSVDLAPTSTDQAHGAFTLALCTLFKAYPGPLSNKQVVMLARQMLNEEMGIEQQHPCLYCSDQNINAPFLWQPDED*

Click here to download the sequence:
Link to NCBI Protein BLAST