Transcript Information: R_Transcript_55908.p1


Annotated TAIR IDAT4G01810.1
Annotated Gene NameSec23/Sec24 protein transport family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:776734-779802 | Reverse length=880
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.428858447666
Replicate 216.816481351942
Replicate 319.46012198562
Condition 2: 8 Hour
Replicate 117.089093244431
Replicate 221.61034298309
Replicate 328.656014914592
Condition 3: 24 Hour
Replicate 124.897529366156
Replicate 220.753385969953
Replicate 324.674333755831


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_55908.p1 GENE.R_Transcript_55908~~R_Transcript_55908.p1 ORF type:complete len:864 (+),score=212.19,Sec23_trunk|PF04811.11|1.3e-14,Sec23_helical|PF04815.11|5.2e-11,Sec23_BS|PF08033.8|8.7e-11,zf-Sec23_Sec24|PF04810.11|2.2e-06 R_Transcript_55908:648-3239(+)
ATGATACCCCTTTCAGACCCAACAAAAATGGGAGAAAACAAGGGGACCCCAAATCCTAGATTCCCCCCGCCATTGATGGTACCAATGGCTTCATCTTCATTATCTTCACCTTCATCATCATCACCATCTGTTGGTACATTAACTCCAAATAATAATAATAATGCAAACCCTCAATTGAGTACACCACCTGGTCCACCTGTATTTACATCCCCATTAAGACCAGCTGCTGTACCTTTCAGAACTTCTCCTGCTTCTCCTCAACCTCTTGCTGTTGCCCTTCAAAGTATCAGCAGCCCTTCTTCTACTTTGCCCCCTTCTTCACCTCCTGGTTATGCTGTTTCTTCTCATCATAATGGTTCTTCTTTTGAGTTTGATGTTTCTGAACATGAGTCTCTTGATGCTTCTTCTGGCACTCCCCTTGTTCTCTTCTCTGCTCACAAGGTTTTGAAGCAGAAAAAGCAAGCAAATGTGGCCAGTTTGGGGTTTGGGGCAGTGGTTTCTACAGGGAGAGAGATCTCTCAAGGACCTCAAATAATTCAGCGTGATCCTCATCGTTGCCAAACATGTGGGGCTTATCCAAGTCCATATTGTAATATCTTACCGCTTTCAGGGCAGTGGCAATGTGTTGTTTGTTGTAACTTGAATGGGAGTGATGGTGAATATGTTGCATCGAGCAAGGAAGAGCTTCGTAGTTTTCCTGAGTTATCCTCTTTAATGGTTGATTATGTACAAACTGGTAGCCGGTTATCGGGTTTTGCTCCCGTTTCAGATTCAAGGATGTCTGCTCCTGTTGTTCTCCTTATTGATGAATGTTTAGATGAGCCACATCTTCAACATTTGCAGAGTTCTCTTCATGCTTTTGTAGATTCACTTCCCCCAACAACTAGGATTGGAATTATCTCTTATGGACGAACTGTATCTGTATATGATTTTTCTGAGGAATCTGCTGCATCTGCTGATGTGCTTCCAGGGGATAAGTCACCGAATGAGAATAGTTTAAGAGCTTTGGTTTATGGGACAGGTGTATATTTGTCTCCTATGCATGCTTCACTTCCTGTAGCACACAACATCTTTTCCTCATTCAGGCCCTTCAATTCAAACACCCCAGAGAGTACACGAGACCGTTGCTTGGGTACAGCAGTGGAGGTTGCCCTGGCAATCATTCAAGGGCCGTCTGCTGATCTGTCTCGAGGTGTGGTTAAGAGACCAGGGGGCAAGAGTAGGCTAATTGTGTGTGCTGCTGGACCCAACACTTTTGGTCCTGGAGCTGTTCCTCATTCTTTCACTCACCCAAACTATCCTTATCTGGAGAAAACTGCAATGAAGTGGATGGAACAGTTGGGTCAGAAGGCACATAGACAGCATACGGTTGTAGATATTTTGTGTGCTGGGACATGTCCTGTCAGAGTTCCTGTTCTTCAACCCCTCCCAAGAGCATCTGGCGGTGTTCTTATCCTTCACGATGACTTTGGAGAGGCGTTTGGTGTGAACTTGCAGCGGGCATCTAGTAGGGCAGCAGGTTCCCATGGTTTGCTGGAGGTATGGATTCCGGAGGAATTTCTAATCACTCAAGTTGTTGGTCCTGGTGAGGAAGCTCATTTGGATACACAGGAACAATTTAAGAAAGATGCCTCTGTCTCCATCCAAATGCTGACTATTGAAGAAACACAAAGCTTCTCAATTTTCATGGAAACCAAAAGAGACATTAAAACTGATTATGTATATTTCCAGTTTGCCGTACAATACTCAAACGTCTACCAAGCTGATATTACTAGAGTTATTACAGTGAGATTGCCAACTGTTGAAAGTGTTTCAGCATATCTTGCTAGTGTACATGATGAAGTTGCTGCAGTTCTTATTTCCAAGAAGACTGTTTTGCGAGCTAAAAATGCTTCTGAGGCAGTTAACATGCGTACGATGATAGATGAAAGAGTGAAAGACATGGCTATGAAGTTTGGTTCACAAGTGCCTAAATCAAAGCTCTATAAGTTCCCTAAAGAGCTTTCTTCCTTGCCAGAGCACTTGTTTCATCTTCGAAGAGGTCCCTTGCTGGGAAGCATTGTTGGTCATGAAGACGAGAGATCTGTATTGAGAAACCTATTTCTTGATGCTTCTTTTGATCTTTCTCTACGAATGGTGTCTCCTCGTTGTTTAATGCACAGGGAAGGGGGCACCTTTGAGGAGCTGCCAGCTTATGATCTGGCAATGCAGTCAGATACTGCTGTTGTCCTAGATCATGGTACAGACATCTTCATCTGGTTGGGTGCAGAGCTTGCTGCTCAGGAAGTAAACTGTGCTGCGGCCTTAGCAGCTTGTAGAACACTTGCAGAAGAGCTGAGTGAAGCAAGGTTTCCAGCTCCACGCATCCTTGCATTTAAGGAAGCAACGTCTCAGGCACGTTATTTAGTTTCTCGGTTAATACCAGCTCACAAGGATCCGGCTTATGAACAGGAAGCAAGATTTCCACAGCTCCGCACATTGACAGCAGAGCAGAGAGCTAAGTTGAAACACAGCTTTTTCCTGCACTTAGATGATCCTAGCTTCTGTGAGTGGATGCGCAGTCTGAAAATTGTGCCACCTGAGCCTATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_55908.p1 GENE.R_Transcript_55908~~R_Transcript_55908.p1 ORF type:complete len:864 (+),score=212.19,Sec23_trunk|PF04811.11|1.3e-14,Sec23_helical|PF04815.11|5.2e-11,Sec23_BS|PF08033.8|8.7e-11,zf-Sec23_Sec24|PF04810.11|2.2e-06 R_Transcript_55908:648-3239(+)
MIPLSDPTKMGENKGTPNPRFPPPLMVPMASSSLSSPSSSSPSVGTLTPNNNNNANPQLSTPPGPPVFTSPLRPAAVPFRTSPASPQPLAVALQSISSPSSTLPPSSPPGYAVSSHHNGSSFEFDVSEHESLDASSGTPLVLFSAHKVLKQKKQANVASLGFGAVVSTGREISQGPQIIQRDPHRCQTCGAYPSPYCNILPLSGQWQCVVCCNLNGSDGEYVASSKEELRSFPELSSLMVDYVQTGSRLSGFAPVSDSRMSAPVVLLIDECLDEPHLQHLQSSLHAFVDSLPPTTRIGIISYGRTVSVYDFSEESAASADVLPGDKSPNENSLRALVYGTGVYLSPMHASLPVAHNIFSSFRPFNSNTPESTRDRCLGTAVEVALAIIQGPSADLSRGVVKRPGGKSRLIVCAAGPNTFGPGAVPHSFTHPNYPYLEKTAMKWMEQLGQKAHRQHTVVDILCAGTCPVRVPVLQPLPRASGGVLILHDDFGEAFGVNLQRASSRAAGSHGLLEVWIPEEFLITQVVGPGEEAHLDTQEQFKKDASVSIQMLTIEETQSFSIFMETKRDIKTDYVYFQFAVQYSNVYQADITRVITVRLPTVESVSAYLASVHDEVAAVLISKKTVLRAKNASEAVNMRTMIDERVKDMAMKFGSQVPKSKLYKFPKELSSLPEHLFHLRRGPLLGSIVGHEDERSVLRNLFLDASFDLSLRMVSPRCLMHREGGTFEELPAYDLAMQSDTAVVLDHGTDIFIWLGAELAAQEVNCAAALAACRTLAEELSEARFPAPRILAFKEATSQARYLVSRLIPAHKDPAYEQEARFPQLRTLTAEQRAKLKHSFFLHLDDPSFCEWMRSLKIVPPEPI*

Click here to download the sequence:
Link to NCBI Protein BLAST