Transcript Information: R_Transcript_5594.p1


Annotated TAIR IDAT5G04200.1
Annotated Gene Namemetacaspase 9
Annotated Gene Symbol(s)AtMC9, MC9
Annotation TypeHomolog
Chromosome Positionchr5:1153893-1154870 | Forward length=325
E-Value4E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.8285174371563
Replicate 23.5532200704504
Replicate 311.453368798076
Condition 2: 8 Hour
Replicate 12.260233687438
Replicate 23.0961221010872
Replicate 32.5132999320536
Condition 3: 24 Hour
Replicate 16.5341451340389
Replicate 24.2413959404956
Replicate 34.3775409373795


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_5594.p1 GENE.R_Transcript_5594~~R_Transcript_5594.p1 ORF type:complete len:130 (+),score=26.19,Peptidase_C14|PF00656.18|3.9e-29 R_Transcript_5594:191-580(+)
ATGGAAATGGGGAAGAAGAGGTTGGCTGTGCTAGTAGGATGTAACTATCCAAACACCCCAATAGAGCTCAAGGGTTGTATCAATGATGTGGAGTCCATGAAGGAGCTTCTGATCGAGCGGTTCGGGTTCGATTCATATCATGTTGTGGTCTTGACTGATGAACCAGGCTCTGGCTTGCTATCAACAGGAGCCAACATTAAGGCAGCACTTAACAGGATGGTCAGCATAGCTGAACCAGGGGATGTCCTCTTTTTCTACTTTAGTGGGTATGGGACATGGTTTCCTAGTCCTATGGACCCCTCTAAATTGGATGAAGCTATTGTGCCTTGTGATTTCAACCTTATCACTGGTGAGAATCTTGATTGCTCATTTATTGGTTATTTGTTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_5594.p1 GENE.R_Transcript_5594~~R_Transcript_5594.p1 ORF type:complete len:130 (+),score=26.19,Peptidase_C14|PF00656.18|3.9e-29 R_Transcript_5594:191-580(+)
MEMGKKRLAVLVGCNYPNTPIELKGCINDVESMKELLIERFGFDSYHVVVLTDEPGSGLLSTGANIKAALNRMVSIAEPGDVLFFYFSGYGTWFPSPMDPSKLDEAIVPCDFNLITGENLDCSFIGYLL*

Click here to download the sequence:
Link to NCBI Protein BLAST