Transcript Information: R_Transcript_5597.p1


Annotated TAIR IDAT1G66150.1
Annotated Gene Nametransmembrane kinase 1
Annotated Gene Symbol(s)TMK1
Annotation TypeOrtholog
Chromosome Positionchr1:24631503-24634415 | Forward length=942
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.12248917136
Replicate 29.4715172224941
Replicate 313.85002536045
Condition 2: 8 Hour
Replicate 110.556471743818
Replicate 211.662457826738
Replicate 313.95249985647
Condition 3: 24 Hour
Replicate 113.639496407627
Replicate 213.822223237418
Replicate 312.566442438534


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_5597.p1 GENE.R_Transcript_5597~~R_Transcript_5597.p1 ORF type:complete len:951 (+),score=216.73,Pkinase|PF00069.21|5.2e-47,Pkinase_Tyr|PF07714.13|3.7e-46,LRR_8|PF13855.2|4.7,LRR_8|PF13855.2|2.7e-06,LRR_8|PF13855.2|5.6e+02,LRR_8|PF13855.2|5.2e+02,LRR_8|PF13855.2|0.00036,LRR_8|PF13855.2|3.2e-07,LRR_4|PF12799.3|5.6,LRR_4|PF12799.3|0.0012,LRR_4|PF12799.3|8.2e+03,LRR_4|PF12799.3|30,LRR_4|PF12799.3|0.0022,LRR_4|PF12799.3|0.0057,LRR_4|PF12799.3|2.7e-05,LRRNT_2|PF08263.8|7.2e-06,LRRNT_2|PF08263.8|0.0018,LRRNT_2|PF08263.8|5.9e+03,LRR_1|PF00560.29|20,LRR_1|PF00560.29|8.7,LRR_1|PF00560.29|4.8e+02,LRR_1|PF00560.29|3.3e+02,LRR_1|PF00560.29|4.7e+03,LRR_1|PF00560.29|31,LRR_1|PF00560.29|23,LRR_1|PF00560.29|13 R_Transcript_5597:215-3067(+)
ATGAAGAAAAGAAACAGTTATTGCCCATATGGGCACTTATATTTGCTCATTTTAGCACTTGGGTTATCTTCATTTTGCTTGAATGTTGTACCGTCACAAGATGATGATGACAGTTCAGTGATGTTAGCTCTCAAGAAGAGCTTGAACCCACCTGAAGCACTTGGATGGACTGACCCAGATCCATGTAAGTGGAACCATATTGTTTGTTCTCAGGATAAGAGAGTGACCCGGATCCAGATTGGTCACCAGAATCTTCAAGGTACTCTCCCACCTAAACTCTCTTCTTTGTCTGAGCTTGAAAGATTAGAGCTTCAATGGAATAATATATCTGGTCCTCTTCCTAGCTTAAGTGGGTTGAGCTCTTTGCAAGTTTTAATGCTTAATAACAACCAGTTTAGTTCAATTCCTAGTGATTTCTTTGATGGGATGACCTCACTTCAGTCTGTTGAGATTGATAATAACCCCTTTGAGGGATGGCAAATTCCTGATTCTCTTAAAAGTGCTTCAACTCTTCAGAATTTCTCTGCTAATTCTGCTAATTTGATTGGTAAGATACCTCATTTCTTTGGGCCTGATACTTTTCCTGGTATGGTTAACTTGCGCTTGGCATTTAATAGCTTGGAGGGTGAGTTGCCTGGGAGTTTTGATGGGTTTCAGATTCAGTCATTTTGGGTTAATGGTCAGAAAAGTGATGCTAAACTTGGGGGGAGGATTGATGTGATTCAAAACATGACTTCTTTGAAAGAGATTTGGTTGCATCAGAATGCATTTACTGGTCCTTTGCCTGATTTTTCTGGCTTGAAAGATTTACAGACCTTGAGCCTTAGAGATAACAAGTTTACTGGGGTTGTGCCATTGTCTTTGATGAATTTGGAGTCACTGGCTGTTGTGAACTTGACTAATAATCTGTTTCAAGGGCCATGGCCTGTGTTCAAGAGCTCGGTTACTGTTGATTCGACTGAGAATACAAACAGTTTTTGCTTGCCTAAGCCTGGTGATTGTAGTCCTCAAGTGAATACACTGCTTTCTGTTGCTAAATCTATGGAGTATCCTATAAGATTAGCTCAAAGTTGGAAGGGGAACGATGTGTGTGCTGATTGGCTTGGTATCACTTGTACCAATGGTAACATTACTACTGTTAATTTGGAGAAAATGGGTCTTAATGGAACAATATCTCCTGATTTTGCATCCGTTAAGTCACTCCAAAGGCTGATTCTGGCAAATAATAATCTCACTGGTACTATTCCTGATGAGCTTACAACTTTGCCATCCCTTACTCAGTTAGATTTGTCAAATAATCAGCTTTATGGAAAAGTACCATCCTTTAAGAAGGGTTTGGCCTTAAATACACATGGTAATGTTGATATTGGAAAGGATGCGAGTGAGATAGCACATGGTCGCGGATCATCTTCATCATCAGGCACAGCTGATGGAAGTGATGGAGCTTCTGGCAATAAGTCTAAACTGTCTACTGGTGCTATCGTTGCTATCTGTGTGGTTGGGGCTGTTCTTTTGTTGCTTGTATGTGGGTTGGTCGGATTTTGTCTCTACAAAAAGAAGCAAAAGAAGTTTACCAGAGTGCAGAGCCCAAATGCAATGGTTGTCCATCCCCGTCATTCTGGTTCTGACAATGAAAATGTTAAGATCACAGTGGCAGGATCAAGTGTCGATGTCGGACAAGTTAGCGAGGCTCATACCATTCCTGGCAGTGAAACAGGTGACATCCAAATGGCTGAGAATGGAAACATGGTTATTTCCATCCAAGTCCTAAGAAATGTGACTAACAATTTCAGTGAGAAGAACATTCTGGGACAAGGAGGTTTTGGGACAGTTTACAAAGGAGAATTGCATGATGGGACAAAGATTGCAGTCAAGAGAATGGAATCTGGGGTGATCGCAGGGAAAGGATTGGCAGAGTTCAAGTCTGAAATTGCAGTTTTGACCAAGGTTCGCCACCGGCATTTGGTTGCACTTCTTGGGTACTGTTTGGATGGGAATGAGAAGCTCCTAGTGTATGAGTACATGCCTCAGGGAACTTTGAGCCAGCATCTATTCAGTTGGGCTGATGAAGGGTTAAAACCTCTTGAATGGACCAGGAGGTTGAGCATTGCCTTGGATGTGGCAAGGGGTGTTGAGTATCTACATGGGTTGGCTCATCAAAGTTTTATTCACAGGGACTTGAAACCTTCTAATATCCTTCTAGGGGATGATATGAGAGCAAAGGTTGCAGATTTCGGTCTTGTACGTTTGGCTCCTGAAGGGAAAGCCTCAATTGAAACTAGGATTGCCGGAACCTTTGGGTATTTGGCCCCTGAATATGCAGTGACAGGACGAGTAACCACCAAAGTTGATGTATTCAGCTTTGGAGTAATCCTCATGGAGTTAATAACAGGAAGGAAAGCTCTGGACGAGACTCAACCTGAGGAGAGCATGCACCTCGTGACATGGTTCAAGAGGATGCACATCAACAAGGAGACATTCCGCAAGGCCATTGACCCCACCATTGATCTCGACGAGGAAACCCTTGCCAGCATCAGCACCGTTGCTGAGCTGGCAGGGCACTGCTGTGCAAGGGAGCCATATCAGAGGCCGGACATGGGCCACGCTGTCAATGTCTTATCTTCTCTAGTCGAGCTTTGGAAGCCGGCAGAGGTCAATTTCGATGACTGTTATGGTATTGATCTTGACATGTCTTTACCTCAGGCCTTGAAGAAATGGAAGGATTCTGAAGGAACTAGCCAGATGGACACTTCATCATCGTCCTTTGTTCGTAGTGTTGATAATACTCAAACTAGCATGGTTGCTCGGCCGTATGGCTTTGCTGAGTCCTTCACATCAGCTGACGGACGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_5597.p1 GENE.R_Transcript_5597~~R_Transcript_5597.p1 ORF type:complete len:951 (+),score=216.73,Pkinase|PF00069.21|5.2e-47,Pkinase_Tyr|PF07714.13|3.7e-46,LRR_8|PF13855.2|4.7,LRR_8|PF13855.2|2.7e-06,LRR_8|PF13855.2|5.6e+02,LRR_8|PF13855.2|5.2e+02,LRR_8|PF13855.2|0.00036,LRR_8|PF13855.2|3.2e-07,LRR_4|PF12799.3|5.6,LRR_4|PF12799.3|0.0012,LRR_4|PF12799.3|8.2e+03,LRR_4|PF12799.3|30,LRR_4|PF12799.3|0.0022,LRR_4|PF12799.3|0.0057,LRR_4|PF12799.3|2.7e-05,LRRNT_2|PF08263.8|7.2e-06,LRRNT_2|PF08263.8|0.0018,LRRNT_2|PF08263.8|5.9e+03,LRR_1|PF00560.29|20,LRR_1|PF00560.29|8.7,LRR_1|PF00560.29|4.8e+02,LRR_1|PF00560.29|3.3e+02,LRR_1|PF00560.29|4.7e+03,LRR_1|PF00560.29|31,LRR_1|PF00560.29|23,LRR_1|PF00560.29|13 R_Transcript_5597:215-3067(+)
MKKRNSYCPYGHLYLLILALGLSSFCLNVVPSQDDDDSSVMLALKKSLNPPEALGWTDPDPCKWNHIVCSQDKRVTRIQIGHQNLQGTLPPKLSSLSELERLELQWNNISGPLPSLSGLSSLQVLMLNNNQFSSIPSDFFDGMTSLQSVEIDNNPFEGWQIPDSLKSASTLQNFSANSANLIGKIPHFFGPDTFPGMVNLRLAFNSLEGELPGSFDGFQIQSFWVNGQKSDAKLGGRIDVIQNMTSLKEIWLHQNAFTGPLPDFSGLKDLQTLSLRDNKFTGVVPLSLMNLESLAVVNLTNNLFQGPWPVFKSSVTVDSTENTNSFCLPKPGDCSPQVNTLLSVAKSMEYPIRLAQSWKGNDVCADWLGITCTNGNITTVNLEKMGLNGTISPDFASVKSLQRLILANNNLTGTIPDELTTLPSLTQLDLSNNQLYGKVPSFKKGLALNTHGNVDIGKDASEIAHGRGSSSSSGTADGSDGASGNKSKLSTGAIVAICVVGAVLLLLVCGLVGFCLYKKKQKKFTRVQSPNAMVVHPRHSGSDNENVKITVAGSSVDVGQVSEAHTIPGSETGDIQMAENGNMVISIQVLRNVTNNFSEKNILGQGGFGTVYKGELHDGTKIAVKRMESGVIAGKGLAEFKSEIAVLTKVRHRHLVALLGYCLDGNEKLLVYEYMPQGTLSQHLFSWADEGLKPLEWTRRLSIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKASIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQPEESMHLVTWFKRMHINKETFRKAIDPTIDLDEETLASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELWKPAEVNFDDCYGIDLDMSLPQALKKWKDSEGTSQMDTSSSSFVRSVDNTQTSMVARPYGFAESFTSADGR*

Click here to download the sequence:
Link to NCBI Protein BLAST