Transcript Information: R_Transcript_56010.p1


Annotated TAIR IDAT3G61800.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2043 (InterPro:IPR018610), ENTH/VHS (InterPro:IPR008942); Has 308 Blast hits to 279 proteins in 95 species: Archae - 2; Bacteria - 30; Metazoa - 120; Fungi - 19; Plants - 44; Viruses - 2; Other Eukaryotes - 91 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:22874723-22876846 | Reverse length=664
E-Value4E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.6493622498099
Replicate 25.0973677311244
Replicate 36.5542399480321
Condition 2: 8 Hour
Replicate 16.4399240179171
Replicate 27.8844727879325
Replicate 38.8659601007092
Condition 3: 24 Hour
Replicate 17.0333166651348
Replicate 25.7369170524623
Replicate 36.1361484237834


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56010.p1 GENE.R_Transcript_56010~~R_Transcript_56010.p1 ORF type:5prime_partial len:346 (+),score=104.46,DUF2043|PF09740.5|4.8e-30,DUF2043|PF09740.5|7e+03 R_Transcript_56010:3-1040(+)
AAGGATTTGTCAGCTGTATCGAATTCGACTTCAACTGCTAATGTGGTGCTGACTAAAGATGCTCCTGAAGGCAGCAAAAGAAGGGAAAATAAAAAGAAGATGCTGACTAAAGATGCTCCTGAAGGCAACAAAAGAAGGGGAAATAACAAGGAGAATAGTAAATCTAAGAACAATGAGATTAGTAAGTCGAAGCAAGGTATTGGTGATTTGGATCCTTTGAGGAGCAAGCTTTTAGCTGACGCTCCTGTTGTGAAGTGGGGGTCTTCATTGGATAATTGGGGTGAGAAGAGGGATGTTTTTGCTAACCAGAGAGGACTTGAGCTTGCTGGCCATTGGGGTAGAGTAGATTACGATGCAACTATACCTGCTGACAAAATTGCTGAACTAAATGTTCATGCAACTATTTACAAAGAAGAGCAAGCTGAAATTCAAGTATGTGGTGCTCCTTTGAGTAAGGGAGGGCTTTGCCAGAGGAGAGATTTGAAAACTTGCCCCTTTCATGGTCCCATTATACCCCGTGATGATGAAGGGAGGCCTATTGATTCTGGGAATGATGAGGGACTACCTGCTACCTCCATGGATAGCAGTAGAAAATCCATGAGCCGAAGTCCTTCCACAGAGGACATTGATATGGATGGAAAGAGCATTCTGGTAGAGGAATTAGCTAAACAGGCTGTGAAAAATGTCAGGGAGAGGGATAAAGAGGATGCTAAGAAGAAAGACATTGATAAACGAGCAGTCAAAAGAGCAAAGCTTGCAAAAGTTCGGGAACACAATGAAGCTGTTTTGCGGGAGGCTGCAATGGCGTCAACCTCTATGTCTGCTGGTATAGGAGAATTTGAAGGTACAAGCAGTAGGGAGACTGCTACTGCCAGAAGTAAGAAGCCCACACTTGCATCGATGTTGCGTAAGAAAGTAACAGCCAAAGATAGGATAGCTCAGAAGCTATTGAGTGCACGAGCAAGACATGTGGCCATCAAGCAGCTGACCCAGGGAGAGGATATCAAGTACAAAGAATCATTTCCAAATCAATGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56010.p1 GENE.R_Transcript_56010~~R_Transcript_56010.p1 ORF type:5prime_partial len:346 (+),score=104.46,DUF2043|PF09740.5|4.8e-30,DUF2043|PF09740.5|7e+03 R_Transcript_56010:3-1040(+)
KDLSAVSNSTSTANVVLTKDAPEGSKRRENKKKMLTKDAPEGNKRRGNNKENSKSKNNEISKSKQGIGDLDPLRSKLLADAPVVKWGSSLDNWGEKRDVFANQRGLELAGHWGRVDYDATIPADKIAELNVHATIYKEEQAEIQVCGAPLSKGGLCQRRDLKTCPFHGPIIPRDDEGRPIDSGNDEGLPATSMDSSRKSMSRSPSTEDIDMDGKSILVEELAKQAVKNVRERDKEDAKKKDIDKRAVKRAKLAKVREHNEAVLREAAMASTSMSAGIGEFEGTSSRETATARSKKPTLASMLRKKVTAKDRIAQKLLSARARHVAIKQLTQGEDIKYKESFPNQW*

Click here to download the sequence:
Link to NCBI Protein BLAST