Transcript Information: R_Transcript_56053.p1


Annotated TAIR IDAT5G37850.1
Annotated Gene NamepfkB-like carbohydrate kinase family protein
Annotated Gene Symbol(s)SOS4, ATSOS4
Annotation TypeOrtholog
Chromosome Positionchr5:15065394-15068783 | Forward length=343
E-Value2.4E-141
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.6374403471705
Replicate 25.5602850904821
Replicate 33.1689162682424
Condition 2: 8 Hour
Replicate 14.2584112951731
Replicate 24.1539978123942
Replicate 33.0133108539773
Condition 3: 24 Hour
Replicate 12.0870733843367
Replicate 22.440898217139
Replicate 33.4605066698652


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56053.p1 GENE.R_Transcript_56053~~R_Transcript_56053.p1 ORF type:5prime_partial len:253 (+),score=45.40,Phos_pyr_kin|PF08543.8|6.4e-17,PfkB|PF00294.20|4.1e-08 R_Transcript_56053:1-759(+)
ACAGGCTATCCGTCTTTCAGAGGCCAAGTTTTGAATGGGAAAGAACTATGGGATTTAATAGAAGGTCTTGAAGCAAATGATTTGTTGTTCTATACCCATTTATTGACAGGTTACATCGGCTCAGTGTCATTTTTAAATACCGTATTGGAAGTTGTTAATAAACTACGATCTGTGAATCCTGGACTAGTTTATGTTTGTGATCCAGTGATGGGTGATGAAGGAAAGCTGTATGTTCCTAAGGAGCTGGTCTCAGTGTACAGGGAGAAGGTTGTCCCTGTTGCAACCATGTTGACACCTAACCAGTTTGAAGCAGAACTTTTGACTGGTTTGAGGATTGTGTCTGAACACGATGGCAGGGAAGCTTGTAACAAACTTCATGCTGCTGGATGCGCAAAGGTAGTGATCACAAGCGTAAATGTTGATGGTAATTTTCTTCTTATCGGCAGTGATATGAAGGACAAGGATCAGGCTCCTGAGCAATTCAAGATCAAAATCCCGAGAATCCCTGCCTATTTTACGGGAACAGGAGATCTGATGACTGCATTATTACTGGGATGGAGCAATAAGTTTTCCGATAACCTTGCTAAAGCAGCTGAGCTTGCAGTTTCAAGCTTGCAGGCACTTCTACAGAGGACAGTTAACGATTACCAACGAGCTGGGTTTGATCCTCAGACAAGCAGTCTAGAAATCCGATTGATTCAGAGCCAGGATGACATTCGCAAACCCCATGTTGCATTCACATCGGAGAAATATAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56053.p1 GENE.R_Transcript_56053~~R_Transcript_56053.p1 ORF type:5prime_partial len:253 (+),score=45.40,Phos_pyr_kin|PF08543.8|6.4e-17,PfkB|PF00294.20|4.1e-08 R_Transcript_56053:1-759(+)
TGYPSFRGQVLNGKELWDLIEGLEANDLLFYTHLLTGYIGSVSFLNTVLEVVNKLRSVNPGLVYVCDPVMGDEGKLYVPKELVSVYREKVVPVATMLTPNQFEAELLTGLRIVSEHDGREACNKLHAAGCAKVVITSVNVDGNFLLIGSDMKDKDQAPEQFKIKIPRIPAYFTGTGDLMTALLLGWSNKFSDNLAKAAELAVSSLQALLQRTVNDYQRAGFDPQTSSLEIRLIQSQDDIRKPHVAFTSEKYS*

Click here to download the sequence:
Link to NCBI Protein BLAST