Transcript Information: R_Transcript_56056.p1


Annotated TAIR IDAT5G37850.1
Annotated Gene NamepfkB-like carbohydrate kinase family protein
Annotated Gene Symbol(s)SOS4, ATSOS4
Annotation TypeOrtholog
Chromosome Positionchr5:15065394-15068783 | Forward length=343
E-Value8.1E-127
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.009688265491
Replicate 211.344775224935
Replicate 312.469393449519
Condition 2: 8 Hour
Replicate 110.070799292819
Replicate 217.221485611558
Replicate 316.614579075919
Condition 3: 24 Hour
Replicate 111.94176263054
Replicate 211.828021905027
Replicate 312.355962323248


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56056.p1 GENE.R_Transcript_56056~~R_Transcript_56056.p1 ORF type:5prime_partial len:248 (+),score=41.75,Phos_pyr_kin|PF08543.8|3.1e-12 R_Transcript_56056:1-744(+)
ACAGGCTATCCGTCTTTCAGAGGCCAAGTTTTGAATGGGAAAGAACTATGGGATTTAATAGAAGGTCTTGAAGCAAATGATTTGTTGTTCTATACCCATTTATTGACAGGTTACATCGGCTCAGTGTCATTTTTAAATACCGTATTGGAAGTTGTTAATAAACTACGATCTGTGAATCCTGGACTAGTTTATGTTTGTGATCCAGTGATGGGTGATGAAGGAAAGCTGTATGTTCCTAAGGAGCTGGTCTCAGTGTACAGGGAGAAGGTTGTCCCTGTTGCAACCATGTTGACACCTAACCAGTTTGAAGCAGAACTTTTGACTGGTTTGAGCTTTAATACTGTAACAAGTTATGACAAGTGTGAGATGATGACTTTCCAGGTAGTGATCACAAGCGTAAATGTTGATGGTAATTTTCTTCTTATCGGCAGTGATATGAAGGACAAGGATCAGGCTCCTGAGCAATTCAAGATCAAAATCCCGAGAATCCCTGCCTATTTTACGGGAACAGGAGATCTGATGACTGCATTATTACTGGGATGGAGCAATAAGTTTTCCGATAACCTTGCTAAAGCAGCTGAGCTTGCAGTTTCAAGCTTGCAGGCACTTCTACAGAGGACAGTTAACGATTACCAACGAGCTGGGTTTGATCCTCAGACAAGCAGTCTAGAAATCCGATTGATTCAGAGCCAGGATGACATTCGCAAACCCCATGTTGCATTCACATCGGAGAAATATAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56056.p1 GENE.R_Transcript_56056~~R_Transcript_56056.p1 ORF type:5prime_partial len:248 (+),score=41.75,Phos_pyr_kin|PF08543.8|3.1e-12 R_Transcript_56056:1-744(+)
TGYPSFRGQVLNGKELWDLIEGLEANDLLFYTHLLTGYIGSVSFLNTVLEVVNKLRSVNPGLVYVCDPVMGDEGKLYVPKELVSVYREKVVPVATMLTPNQFEAELLTGLSFNTVTSYDKCEMMTFQVVITSVNVDGNFLLIGSDMKDKDQAPEQFKIKIPRIPAYFTGTGDLMTALLLGWSNKFSDNLAKAAELAVSSLQALLQRTVNDYQRAGFDPQTSSLEIRLIQSQDDIRKPHVAFTSEKYS*

Click here to download the sequence:
Link to NCBI Protein BLAST