Transcript Information: R_Transcript_56059.p1


Annotated TAIR IDAT5G37850.1
Annotated Gene NamepfkB-like carbohydrate kinase family protein
Annotated Gene Symbol(s)SOS4, ATSOS4
Annotation TypeOrtholog
Chromosome Positionchr5:15065394-15068783 | Forward length=343
E-Value2.2E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0658663331223
Replicate 21.226061338178
Replicate 30.33440492841099
Condition 2: 8 Hour
Replicate 10.89364470610384
Replicate 22.9379260813237
Replicate 31.7224156063141
Condition 3: 24 Hour
Replicate 12.346053293342
Replicate 20
Replicate 32.5562282846012


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56059.p1 GENE.R_Transcript_56059~~R_Transcript_56059.p1 ORF type:3prime_partial len:137 (+),score=4.70 R_Transcript_56059:272-679(+)
ATGGCACGGCCGCCCATTCTTTCGCTCGCCTTGCCATCGGATACCGGCCGTGTTCTTAGTATTCAGTCCCACACTGTTCAGGGTTATGTTGGCAATAAATCGGCTGTGTTTCCTCTTCAACTTCTTGGTTATGATGTTGACCCTATTAATTCTGTACAATTCTCGAATCACACAGGCTATCCGTCTTTCAGAGGCCAAGTTTTGAATGGGAAAGAACTATGGGATTTAATAGAAGGTCTTGAAGCAAATGATTTGTTGTTCTATACCCATTTATTGACAGGTTACATCGGCTCAGTGTCATTTTTAAATACCGTATTGGAAGTTGTTAATAAACTACGATCTGTGAATCCTGGACTAGTTTATGGTAGGTCACTGTATATGTTATTTATAATAGCTGAGATAGGTCCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56059.p1 GENE.R_Transcript_56059~~R_Transcript_56059.p1 ORF type:3prime_partial len:137 (+),score=4.70 R_Transcript_56059:272-679(+)
MARPPILSLALPSDTGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPINSVQFSNHTGYPSFRGQVLNGKELWDLIEGLEANDLLFYTHLLTGYIGSVSFLNTVLEVVNKLRSVNPGLVYGRSLYMLFIIAEIGP

Click here to download the sequence:
Link to NCBI Protein BLAST