Transcript Information: R_Transcript_56126.p1


Annotated TAIR IDAT2G42610.1
Annotated Gene NameProtein of unknown function (DUF640)
Annotated Gene Symbol(s)LSH10
Annotation TypeOrtholog
Chromosome Positionchr2:17748005-17748538 | Forward length=177
E-Value8.8E-88
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.585212660758
Replicate 214.381027682396
Replicate 313.806800742886
Condition 2: 8 Hour
Replicate 116.32390996483
Replicate 211.639911095412
Replicate 310.36050834497
Condition 3: 24 Hour
Replicate 114.676223798532
Replicate 27.5531708529374
Replicate 312.293094413189


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56126.p1 GENE.R_Transcript_56126~~R_Transcript_56126.p1 ORF type:complete len:219 (+),score=14.13,DUF640|PF04852.8|1.1e-56 R_Transcript_56126:84-659(+)
ATGTCAAACACAACTCATTTCTCAGGACAGCTGTCTGGATTGCTGCCGAACCATAAGGTCCGACAGTGCATCCAGACGGATCAGCCCAACTCCAATCCTGTCGCTCAGCTGAGCCGGTATGAGTCTCAGAAGCGGCGGGACTGGAACACCTTTGGGCAGTACCTGAGGAACATGAGGCCACCGGTGGCCGTGTCACAGAGCACGTGCCATCACGTGCTAGATTTCCTCAGGTACCTTGATCAGTTTGGAAAGACTAAGGTTCATGTGAAAGGATGTGTGTTTTTCGGGCAACCCGACCCACCTGCCCCTTGCACCTGCCCGCTCCGACAGGCTTGGGGCAGCCTTGACGCCTTGGTGGGTCGCCTTCGGGCTGCCTACGAGGAGCACGGTGGGTCACCCGAGACCAACCCGTTTGGAAACGGGGCGATCCGGGTCTTCCTAAGGGAGGTAAAGGAGTGTCAATCTAAAGCTAGGGGAATTCCGTACAAGAAGAGAAAGAAGAAGAAGACACAACAAATGATCATCAAACAACAACAACAAGCAACTGAGGCTACTTCTTCTACTTGTCCTCACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56126.p1 GENE.R_Transcript_56126~~R_Transcript_56126.p1 ORF type:complete len:219 (+),score=14.13,DUF640|PF04852.8|1.1e-56 R_Transcript_56126:84-659(+)
MSNTTHFSGQLSGLLPNHKVRQCIQTDQPNSNPVAQLSRYESQKRRDWNTFGQYLRNMRPPVAVSQSTCHHVLDFLRYLDQFGKTKVHVKGCVFFGQPDPPAPCTCPLRQAWGSLDALVGRLRAAYEEHGGSPETNPFGNGAIRVFLREVKECQSKARGIPYKKRKKKKTQQMIIKQQQQATEATSSTCPH*

Click here to download the sequence:
Link to NCBI Protein BLAST