Transcript Information: R_Transcript_56131.p1


Annotated TAIR IDAT5G16680.1
Annotated Gene NameRING/FYVE/PHD zinc finger superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:5467534-5472956 | Reverse length=1311
E-Value3E-110
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.318192889394
Replicate 26.3847486024282
Replicate 39.128632975121
Condition 2: 8 Hour
Replicate 18.2833223427484
Replicate 211.089002370313
Replicate 312.510440925724
Condition 3: 24 Hour
Replicate 111.504507116336
Replicate 28.6417259742262
Replicate 311.310003537096


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56131.p1 GENE.R_Transcript_56131~~R_Transcript_56131.p1 ORF type:complete len:1345 (+),score=335.92,PHD|PF00628.25|1.1e+04,PHD|PF00628.25|2.1e-06 R_Transcript_56131:544-4578(+)
ATGATCCAAAAGAAAGCCCGGATGGACCCTAAATGTTTAGAATGTGATAATAAAGAGGATGAGGTTTTTTGTTCTGGCGGGGAAGAAGATGATAAACGTGCATCATTTGCTATTGATAATTGTCATCAAGGAGTTGAGCAGCCAATTGATTCTCAGACTGCCTATGCCTCTGCCTCTGGGAGTTTAGGTCAGTGTACTGCCAATGAAGACAGGCGCCTCCTCGGATCTAGGAAAAATTGTACTGACTGTCTTGACCAGGATGACAAATCCATCGACTCAAATAAGTTGTCTGATTCTGATGAGATGCATGAACCTCCTTTGCAAACATTAGCTCAAGATGACGCTGATGAATCTGATGTTGAGGAAGAAGATGTGAAGGTCTGTGACATATGTGGTGATGCTGGTCGCGAAGATTTGCTTGCAGTATGTAGTAGATGCAGTGATGGAGCAGAACACACGTACTGTATGCGTGAGATGCTTGATAAAGTTCCAGAAGGTGATTGGCTTTGTGAAGAATGCAAATTTAATGAAGAAGGAGAAGCACAGAAACAGGAGCAGTCCAGAATGATTGGTACTAATGAAAGAACTAAATTTCTAGGAAGGGCTAGCTCTGTTTCCTGTGATCCTTCTTTTAAGTCAGATAACAAAGAACTTTTTGGTGAACGGGGTAAAGTGAAAAATGTTAGTCTGAATAAACAAGTTCCTTCTAAGAGATCTGGAGACAGCATTGAAGCTGGTCTGACAGCAAAAAGGCAGGCACTTGAATCAAGTCTGGGTGTGCCAACAGCATCCAGCCCTAGTTGGGTGCCTGTGTTGTCTAAGGATAATTCATTCAAGAATCTGGATAAGATAAAAGTAAAGCCTACCAATCAAATACCTGCTGGCGCTGAATCCACTGCAGATTCCTCAGAAGATGGGCGCTCTCCTTCCACAAGTGCTGTTCATGCCCCCAAAGGGAATTTTGTGAAGTCAAATTCCTTTAGCTCTGGTAATTCCAAGCTGAATTTAAAGGTGTCAGACGAAGCTCCTCAAAAGCAAAAACAAGGTATTGATGCAAAAGATGGGCCAGGAAAATTGATTGGCAAATCAATGTCTTTTAAAGGATTAGGTCGATCAAATGTAGGTGAACCAAAAGTTAAAATGCTGTCCCCGAAATGCACTCCTGTTCAAGAGTTAAAGGTTCAGAAACAAGTAAGAGACCGTAGTTCATATGAGCGAAAGAGCATTGCTAAATCGGATCATTCTTTTCCTGGTCCAATGTCAGTTACTTCTAGCAAGCGTCCTTCCCTTGGGGATAATGTGCCAACATCTTCTGTAAATAGTCGTGAGTACAAGAATACTCAATCTGATGGAAAACTGACTACTTTCTCAAAGCATGCTTGCCATTCTGTCCAAAAGTCTTCAGATGCTACAGCTACTACAGTTGATCTTAAGAGTCCATCAGCGACAAGCGTTAGTGGACCTGTGTTTGTCAATGGAACAAGTAGCTCTGCGGATTTCAAGCCAAGCCTTGTCAGCCTGAAGGAGGGACCAGCTCTAAGTTCTTCTCGGACTGCCGACAGAGCGGTTGTTTGTGCCAATGGATCAAAACTAGATGTGCTTGACAATCAAAGTGAAAAAACCTCAGAGAATACCTCTGGGCGCTCCAGAGAAGGTGTTGGTGCAGGCACGGTAGGTGGAAATCGTCGTGGGACTTCTTCAGATGTTTTTGTGTCTAGAACAAAAGAAACCAATCAAAGCATTCATGAAGAAAATAAATTAAAAGCTGCAATTGAGGCAGCCATGCAAAAAAAGCAGGATATATATAAGAAGAACAGAACTCCTGATAAACCCAACGAGTTGCTAACACCAAACACCCACGGAAACCATGTGGGAGATGCAGTTTCAAATCAGTCAAGACCTGCCATATGTGAGGAAGCTATGTTTGATGGGGTTGCAACCCTGCGTACCCATTATTCCAACAGACAGACATCATTAAGCAGTGCAAAACACTTCAAAGTGTACCCTGCTGATTTTGTAACTTCTCCTCTTGGAGAGTCAGTTTTGACCATCTCACAGATCCCTGAACAAGGATCAGTATGGCAAGGAGGTTTTGAGATTCGTAGGAGTGGAAAACTTCCTGACATGTGCGGTGGATTTCAAGCCCATTTGTCAAGTTTAGCTTCCTGTAAAGTGATTGAAGTGGTGAAAATGTTCCCACATAAAATTGTTCTCGATGAAGTACCTCGGCCTTGTGCATGGCCAGTGCAGTTCAAAGAAAGTGGTGCTCGAGAGGATAATATTGCTTTGTATTTTTTTGCCAAAGATCATGAGAGTTATGTAAGGAGTTACAAGATCTTGTTAGAGTACCTGATGAAGCATGACTTGGCTCTGAGAGGAAATGTCAATGGGATTGAACTCCTTGTATTCCCATCAAACCACCTTCCTGATAAATCACAATGTTGGAATGCGCTGTTTTTTATGTGGGGTGTATTCAGAGGAAGGAGGCAACTTTGTCCAGATAATGAATCTGGTTCCATGAAAATGCGTGATAACTCCATGTGTAATATGGCCCTGCTCAATAAAGATGTTCCATTAGCTTTGTCTCCTTCCGAGGACTCATGTCAGCAAAGGCCTGTGCCCGAAGGCTTGTCTGTATCAGGTTGTAGCTATAATGTCGTCTCAAGCTGCAAACTTCGTGGCTCAGTTTTATCAACTCCTCGACACTTAAGCAGTCTGTCTAATGGTGACTGTAATCAGAAACTTTCTGTCAGTAGGACTTGCTTGAGTTCACAAACAAGCATCGAGGATCCTCCGAGGAGACCTGAAAGCCATTCTTCAGGATCATGTGCCAAAATAGGCTCAGAATCAGGGACCACTGCTTTGGAAAATCATTGTTGTCAAGCCCCTGATATAGTTGTTGAACATCAGGCATCGATGCAGGAAGTTGATAGAGGCAATCAACTCCATGAAGCCCAGGAGTCACCATCATACCTTATGCAAGATATTTCTTCTCTATCCTCCAAGGTGCCTGTGGCTGCTGAACAAGACAGTGGTGGGTCTGTTGTCAGTTCAGAAGAACAGGCGTTTGAAGCTGTACACAACAATGATGTAACGTCTAAAGTTTGCTTTAGGCAAGAGCATGGGAGTGTGGGTGACATAAAAAATTTGGTAGGTGAGGTAAAACTCAAGGATGATGTGAAGCACGAGGAGGAGGAAATGAAATCTAAGCAGAAGAATGATAGGAGTAAGTTGAAACTGGAGGGTAGCTTGAAGCAGCAAGGGTATGTGGATATAAATGTTTCTGCTGATAGTAGTACTATGGAGGAGTTCCACAGCCTGCAATTCTCTCCTAAGAGACATTCACGTGTGGATTCTACTGAATCTATATCACAAGCTGGTTCAGTGATGACATCTCAAAAGAGGCCTTGGATTGATAAGAAAGACCCATTAGAGAGTGAAGATCAATCAAGCACAAATAAGAGGATGAAGGGGGCTGAGGGCTTTTGTGGAAGTGATGTATATAGACTCCCAAGTTCTGTCAGTGATAGTTTCTCAGCTCAGATGCATGGGGTTAGTACTAGCTCACCTAGGGAGGATACATCTAATGAAGCTTATGGTGAGAAGTCAACTTTTGCAAATCCAGAATCAGCTGGGAGATACCTTTTTCTGGTAGATTCAAATCCTGGCCAGAGTACCCAGTCAGGAGACAACTCCTCGCCTTGGAAGGTGTCTTTGTCGGAAAATGACGATCGACTACCTGATGGATCCCCAAACTTGGAACTTGCTTTAGGTGTTGAAAAGAAACAATCAAGCAAAGGAGTCTTGCCTTTCTTTGCAGGAATAGTTGATAAAAAAGATCCAGACCTGCCGCCTGACACATCAAGAGTAGAGGATGAAGATGGAAGTGCGGCTCTTTCTCTATCTCTTGCATTTCCATTTTCAGACAAGGAAAGAAAGTTTGAAACCTCTCCAACAAATGTGGAACGGGCCCTTACGGGGAGGCATGAGGTGAATACATCTTTGCTTCTCTTCCGCAGGTCATCACGCAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56131.p1 GENE.R_Transcript_56131~~R_Transcript_56131.p1 ORF type:complete len:1345 (+),score=335.92,PHD|PF00628.25|1.1e+04,PHD|PF00628.25|2.1e-06 R_Transcript_56131:544-4578(+)
MIQKKARMDPKCLECDNKEDEVFCSGGEEDDKRASFAIDNCHQGVEQPIDSQTAYASASGSLGQCTANEDRRLLGSRKNCTDCLDQDDKSIDSNKLSDSDEMHEPPLQTLAQDDADESDVEEEDVKVCDICGDAGREDLLAVCSRCSDGAEHTYCMREMLDKVPEGDWLCEECKFNEEGEAQKQEQSRMIGTNERTKFLGRASSVSCDPSFKSDNKELFGERGKVKNVSLNKQVPSKRSGDSIEAGLTAKRQALESSLGVPTASSPSWVPVLSKDNSFKNLDKIKVKPTNQIPAGAESTADSSEDGRSPSTSAVHAPKGNFVKSNSFSSGNSKLNLKVSDEAPQKQKQGIDAKDGPGKLIGKSMSFKGLGRSNVGEPKVKMLSPKCTPVQELKVQKQVRDRSSYERKSIAKSDHSFPGPMSVTSSKRPSLGDNVPTSSVNSREYKNTQSDGKLTTFSKHACHSVQKSSDATATTVDLKSPSATSVSGPVFVNGTSSSADFKPSLVSLKEGPALSSSRTADRAVVCANGSKLDVLDNQSEKTSENTSGRSREGVGAGTVGGNRRGTSSDVFVSRTKETNQSIHEENKLKAAIEAAMQKKQDIYKKNRTPDKPNELLTPNTHGNHVGDAVSNQSRPAICEEAMFDGVATLRTHYSNRQTSLSSAKHFKVYPADFVTSPLGESVLTISQIPEQGSVWQGGFEIRRSGKLPDMCGGFQAHLSSLASCKVIEVVKMFPHKIVLDEVPRPCAWPVQFKESGAREDNIALYFFAKDHESYVRSYKILLEYLMKHDLALRGNVNGIELLVFPSNHLPDKSQCWNALFFMWGVFRGRRQLCPDNESGSMKMRDNSMCNMALLNKDVPLALSPSEDSCQQRPVPEGLSVSGCSYNVVSSCKLRGSVLSTPRHLSSLSNGDCNQKLSVSRTCLSSQTSIEDPPRRPESHSSGSCAKIGSESGTTALENHCCQAPDIVVEHQASMQEVDRGNQLHEAQESPSYLMQDISSLSSKVPVAAEQDSGGSVVSSEEQAFEAVHNNDVTSKVCFRQEHGSVGDIKNLVGEVKLKDDVKHEEEEMKSKQKNDRSKLKLEGSLKQQGYVDINVSADSSTMEEFHSLQFSPKRHSRVDSTESISQAGSVMTSQKRPWIDKKDPLESEDQSSTNKRMKGAEGFCGSDVYRLPSSVSDSFSAQMHGVSTSSPREDTSNEAYGEKSTFANPESAGRYLFLVDSNPGQSTQSGDNSSPWKVSLSENDDRLPDGSPNLELALGVEKKQSSKGVLPFFAGIVDKKDPDLPPDTSRVEDEDGSAALSLSLAFPFSDKERKFETSPTNVERALTGRHEVNTSLLLFRRSSRK*

Click here to download the sequence:
Link to NCBI Protein BLAST