Transcript Information: R_Transcript_56164.p1


Annotated TAIR IDAT3G22980.1
Annotated Gene NameRibosomal protein S5/Elongation factor G/III/V family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:8160269-8163316 | Reverse length=1015
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.8710858766326
Replicate 24.4245077505609
Replicate 36.0119215530132
Condition 2: 8 Hour
Replicate 15.9338350877903
Replicate 25.5045465835102
Replicate 38.1195422985831
Condition 3: 24 Hour
Replicate 18.0924071453976
Replicate 26.1475865298448
Replicate 38.0506499997783


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56164.p1 GENE.R_Transcript_56164~~R_Transcript_56164.p1 ORF type:complete len:1044 (+),score=280.37,GTP_EFTU|PF00009.23|1.6e-52,EFG_C|PF00679.20|3.8e-17,GTP_EFTU_D2|PF03144.21|1.2e+03,GTP_EFTU_D2|PF03144.21|6.3e-09,EFG_II|PF14492.2|7.6e-07 R_Transcript_56164:184-3315(+)
ATGGGTGATCAAGAAGACAACAACAAGGAGGAGGAGGAAGTAAGAAACATATGCATACTAGCCCACGTTGACCATGGCAAAACAACTCTTGCTGACCATCTCATTGCCTCCTGTGGTGGTGGTGTTCTTCACCCAAAACAAGCTGGTAAGTTAAGATTCATGGACTTCTTAGATGAAGAACAAAGAAGAGCTATTACCATGAAAAGTAGTTCTATTTCCCTTCAATATTATAACAAACAAGAACAACATGCTTATACTATTAACTTGATTGACTCTCCTGGTCATATGGACTTCTGTAGTGAAGTTTCAACTGCTGCCCGATTAAGTGATGGTGCTTTAGTTCTTGTTGATTCTGTTGAGGGTGTACATATTCAAACTCATGCTGTTTTGAGACAAGCTTGGGTTGAGAAACTCACCCCTTGTTTAGTTTTGAATAAGATTGATAGGTTGATTACTGAGTTGAGGCTTACTCCGATGGAAGCATATACTCGGTTGTTGAGGATTGTACATGAGGTTAATAACATTGTTAGTGCTTATAAGGCTGAGAAGTATTTGTCTGATGTTGATTCTATACTTGCTTCGGGGGGGTCGGTTGTTGTTGGGGATGAGAGTCATGAGGTTGTTGAGGATGATGAGGAGGATACCTTTCAACCCCAGAAAGGGAATGTGGCTTTTGTTTGTGCTCTTGATGGGTGGGGTTTTTGTGTAGGGGAGTTTGCTGAGTTTTATGCTTCGAAACTTGGGGCGAGTACGGCTGCTTTGAAGCGGGCGTTTTGGGGCCCTAGGTATTTTAATCCTAAGACTAAGATGATTGTCGGGAAGAAGGCAATGGGGGGAGGAGGGAGTAAGGTTCGGCCTATGTTTGTGCAATTTGTTTTGGAACCACTGTGGCAGGTTTATCAGGCTGCTCTTGAGCCTGATGGTGATAAGGGTGTGTTGGATAAAGTGATCAAGTCGTTTAATTTGTCTATTCCACAACGGGAGCTTCAGAACAAGGATCCTAAGGCTGTGCTTCAGGCTGTTATGAGCCGCTGGCTTCCACTTTCAGATGCCATCTTGTCAATGGTTGTTAGATGTATGCCGGACCCTAGGACTGCACAGTCTTTCCGTATCTTCCGTTTGCTTCCCAAGAGAGAGGTGGTTGATGAGGTGGCTGGCTCAGAAGTGTTTGCAGATTCGGAGCGTGTAAGGAAGTGTGTGGAGAAGTGTGATTCTAGCGTTGAAGCGCCTGCTGTTGCATTTGTTTCGAAGATGTTTGCAGTCCCTCTGAAGATGCTTCCCCAGAGGGGTCCCAATGGGGAGATTCTGAGCAATTTATATGATGAAGGCGGAGGTAACAATGAAGGAGAAGAATGCTTTCTTGCATTTGCTAGGATTTTTAGTGGAGTCCTAACTTGTGGGCAGAAGATATATGTGCTTTCTGCTCTGTATGATCCACTGAAAGGGGAAGCAACTCAGAAGCATTTGCAGGAAGCTGAATTGCAGTCGTTGTATCTGATGATGGGTCAGGGTCTTAAGCCTGTCTCGTCTGCTAAGGCAGGGAATGTTGTTGCTATCCGAGGGCTGGGCCAGCATATCTTAAAGAGTGCAACTCTTTCATCAACTAAGAACTGTTGGCCCTTCTCAAGCTTGATGTTTCAGGTTTCACCAATGTTAAAAGTTGCAATCGAGCCATCTGATCCAGCTGATATGGGTGCACTGATGAAGGGTTTGAGGCTTCTGAATCGAGCAGACCCATTTGTGGAGGTTACAGTCTCATCAAGGGGAGAGCATGTGCTGGCTGCTGCAGGAGAGGTGCACCTTGAGAGATGTATAAAGGATTTGAAAGAGAGGTTTGCGAAGGTGAGCTTAGAAGTATCTCCTCCGCTTGTGTCGTACAAAGAGACAATCGAGGGTGAGGGACCTAATCCACTGGACAATCTGAAGATGCTGACTGGGAGTACCGACTATGTCGAGAAGATGACACCCAATGGAAGATGTACTGTTCGAGTGTATGTCATGAAGCTTCCAACTGCGCTTACTAAGTTGCTTGATGAAAGTTCTGATGTACTAGGGGAAATTATCGGTGGCAAACTTGGCCAGACCTATAAGAAGTTGGAGTCCCGGATAGGTTCTGCTGCACAAGATGAGGAACCACTTGAAGCACTCAGGAAACGGATTATGGATTCCCTAGAAAGTGACATTGTTTCTGCAAATGGGGAAAATGACAAGGATAAGAGTGAGAAGTGTAAAGTTTTGTGGGAGCAGCTTCTTAAGAGGATTTGGGCTCTTGGCCCTGGACAGGTTGGCCCTAATTTACTTCTTACCCCAGACAGTAAAGGAGTAAATGCAGATAATTTGGTCCTCATCGGAGGCTCCTCTTATGTGTCTGCTAAAATGGGGTTTGTTAGTGAAGCTGGAAGCAGTGATGCAGTTGACTCGGCTTCTCCTGAACCAAGCCAATCACTTTATGCAGAAGCTGTGAGCCTAGAGAGTAGTCTTGTATCTGGGTTTCAAATAGCTACATCGGCTGGTCCATTGTGCGATGAACCTATGTGGGGTTTGGCTTTCATTGTTGAGGCTTATATATCTCCTGCAGCTACTCAATCAAGTGATTCTGAAATTTCTCAACAGCGAACGGAGCAATATGGGATGTTCACTGGTCAGGTTATGACTACTGTCAAGGAAGCATGTCGAGCTGCTGTACTTCAGAAAAAACCCCGTCTTGTTGAAGCTATGTACTTCTGCGAATTAAACTCCCCAGCTGAATTTTTGGGACCCATGTATGGTGTGCTTGCTCGTAGGAGGGCCCGGGTTGTGAAGGAAGAAATGCAAGAAGGTTCTGCATTATTTACTGTGCATGCTTACTTGCCTGTTTCTGAAAGCTTTGGATTTGCGGATGAGCTGAGGAAAGGGACTGCTGGGTCTGCAAGTGCCCTGCTTGTTCTCAGTCACTGGGAAGCACTTAACGAGGATCCGTTCTTTGTTCCTAAAACAGAGGAAGAGCTTGAAGAGTTTGGAGATGGTTCTAGTGTTCCCAAAAATACAGCGAGAAAGCTCATTGATGCTGTTAGGCGGAGGAAAGGACTACCGGTGGAGGAAAAAGTTGTTCAGCACGCAACAAAGCAGAGGACCTTGGCTCGGAAGGTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56164.p1 GENE.R_Transcript_56164~~R_Transcript_56164.p1 ORF type:complete len:1044 (+),score=280.37,GTP_EFTU|PF00009.23|1.6e-52,EFG_C|PF00679.20|3.8e-17,GTP_EFTU_D2|PF03144.21|1.2e+03,GTP_EFTU_D2|PF03144.21|6.3e-09,EFG_II|PF14492.2|7.6e-07 R_Transcript_56164:184-3315(+)
MGDQEDNNKEEEEVRNICILAHVDHGKTTLADHLIASCGGGVLHPKQAGKLRFMDFLDEEQRRAITMKSSSISLQYYNKQEQHAYTINLIDSPGHMDFCSEVSTAARLSDGALVLVDSVEGVHIQTHAVLRQAWVEKLTPCLVLNKIDRLITELRLTPMEAYTRLLRIVHEVNNIVSAYKAEKYLSDVDSILASGGSVVVGDESHEVVEDDEEDTFQPQKGNVAFVCALDGWGFCVGEFAEFYASKLGASTAALKRAFWGPRYFNPKTKMIVGKKAMGGGGSKVRPMFVQFVLEPLWQVYQAALEPDGDKGVLDKVIKSFNLSIPQRELQNKDPKAVLQAVMSRWLPLSDAILSMVVRCMPDPRTAQSFRIFRLLPKREVVDEVAGSEVFADSERVRKCVEKCDSSVEAPAVAFVSKMFAVPLKMLPQRGPNGEILSNLYDEGGGNNEGEECFLAFARIFSGVLTCGQKIYVLSALYDPLKGEATQKHLQEAELQSLYLMMGQGLKPVSSAKAGNVVAIRGLGQHILKSATLSSTKNCWPFSSLMFQVSPMLKVAIEPSDPADMGALMKGLRLLNRADPFVEVTVSSRGEHVLAAAGEVHLERCIKDLKERFAKVSLEVSPPLVSYKETIEGEGPNPLDNLKMLTGSTDYVEKMTPNGRCTVRVYVMKLPTALTKLLDESSDVLGEIIGGKLGQTYKKLESRIGSAAQDEEPLEALRKRIMDSLESDIVSANGENDKDKSEKCKVLWEQLLKRIWALGPGQVGPNLLLTPDSKGVNADNLVLIGGSSYVSAKMGFVSEAGSSDAVDSASPEPSQSLYAEAVSLESSLVSGFQIATSAGPLCDEPMWGLAFIVEAYISPAATQSSDSEISQQRTEQYGMFTGQVMTTVKEACRAAVLQKKPRLVEAMYFCELNSPAEFLGPMYGVLARRRARVVKEEMQEGSALFTVHAYLPVSESFGFADELRKGTAGSASALLVLSHWEALNEDPFFVPKTEEELEEFGDGSSVPKNTARKLIDAVRRRKGLPVEEKVVQHATKQRTLARKV*

Click here to download the sequence:
Link to NCBI Protein BLAST