Transcript Information: R_Transcript_56170.p1


Annotated TAIR IDAT1G15130.1
Annotated Gene NameEndosomal targeting BRO1-like domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:5206217-5209848 | Reverse length=846
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 128.24912900914
Replicate 222.27391685954
Replicate 325.352577546144
Condition 2: 8 Hour
Replicate 124.76698854021
Replicate 231.294965515965
Replicate 336.073981611814
Condition 3: 24 Hour
Replicate 129.336440234713
Replicate 224.612757338279
Replicate 328.04440692374


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56170.p1 GENE.R_Transcript_56170~~R_Transcript_56170.p1 ORF type:complete len:871 (+),score=200.73,BRO1|PF03097.14|2.4e-107,BRO1|PF03097.14|6.6,ALIX_LYPXL_bnd|PF13949.2|8.2e+02,ALIX_LYPXL_bnd|PF13949.2|6.7e+02,ALIX_LYPXL_bnd|PF13949.2|1.6e-74 R_Transcript_56170:303-2915(+)
ATGGCTTCCTCAACCTCATCATCATCGACAACCAACATCATGCTCGCAATCTACGAGAAGAAAACAACCTCAATCGACCTCTACCGTCCTCTCCGCAACTTCATCGCCTTCAATTACTCAGAACGCGAAGCTCAAAACCTCGAAGACGATCTCGAAACCGTAAAGCAACTCCGTCCTTCTCTCTCCTTGTCCTCCGATTCACCTCCAGCTCGTCGAGACCTCCTAACCAAGTACTTCAAATGCCTTTGTTTGATGGAAACTCGGTTCCCAATTTCCCCTGATAAAGACCACATCAACTCAATCCAATTCACTTGGTTTGACGCCTTTAAGCAGAAGCAAAAATCTTGCCAGACTAATATCCATTTAGAGAAGGCTGCTGTGCTGTTTAATCTTGGGGCTGTTTATAGTCAGATTGGGCTTTCCTTTGATCGGTCTAGTGTTGATGGGAGGAAACAGGCTGTTCATAATTTTGCCCTAGCGGCTGGGGTTTTCGCTTATTTGAGGGATAATGTGGCGGTTAAGGCGGCCGCTGGTGGGGCTGCCACCGTTGATGTTTCGGTCGAGTGTGCCGGTATGTTGGAGAGGTTGATGCTTGCTCAGGCTCAGGAGTGTGTTTTTGAGACTACTATTGCTAAAGGGAGTACTCCTGGTGTTTGTGCCAAGATCTCTCGTCAGGTGGGAATATACTATGAAGAAGCTTTAGCAGCATTAAATGTTGCTCCTCTTAATTCACACTTTGACAAGACGTGGGTAGCTCATGTACAGCTGAAAGCAGCTCTTTTTTTTGCCGAGGCTTGCTATAGGTACAGTTTAGAGCTTCATGAGAAAGAGGAGATTGCTGAAGAAATTGCTAGGTTGAAGACTGGGATTAGTGCTTTGTCAGAAGTGAAGAGATCAGCCAAAGGAGCTCCTGCACAACTTCTTGATGCTGTTAGTAAGCTGGAGACGAGTCTTAATCGTAATTTGGAGAGGGCAATGAAAGAGAATGATAGAGTGTACCTGCAAAGGGTCCCACCAGCCAGTTCTTTGTCACCTCTATCTGCATTCTCCATGGTAAAACCCACGCCTTTGGATGAAGTATTGGATGCCAGCAAAGAAAAGATGTTTCAATCAATTGTCCCAGACAGTAGTGCAAAGGCGCTATCAAGATACACTGAAATGGTTGATGATGTTATCAGAACACAGGCTGAGAAGCTACAGCAAGGAAGTGAGCTGGCTAGAGTGAGGCTTAAGGAAATGGACTTGCCTGATTCTATTCTTGCAGTTGAAGGGAATATGTCCCTTCCAGAAACTCTTAAAGAAGATGTTGAAGCAGTGCAGATTAGTGGTGGTCCAGCTGGACTTGAAAGCGAGCTGCAGCAGCTTAGGGATCTGAAAAGGGTCAATCAGGAATTGTTGGTTCAGACAGAGGAGTTGTTGCAGAAAGAATCACAAGAAGACGCTCAATTTAGAAGTCAATTTGGAACGAGATGGACTAGGCCTCAATCTAGTACACTTACAAAGAACCTGCAGGATAGGCTGAACAGATTCGCAGGGAACTTGAAGCAAGCTACAGACAGTGATGCTAGAATTGAGCGCTCTGTGAGGGATAATTCTGCGCTCATGTCCATCCTTGATCGGCATCCGATTGAGGCTGCGCTTCCGACCCTTGCAAAGCCAATTATGTCATTGGATGCTAATGAGGATGCTATTGTTGGAGCATTGAAGCAGAGTCTGAGGCAGTTGGAGACTCTTGGAGCACAACGAGCAGGTCTTGAAGACATGTTAAAAGAAATGAAAAGAAAGGATGACATTCTACCAAAGCTGATGACATCTACTGGTTCTTATGAGGATCTGTTTAGGAAAGAGATAGCAAAATATGACCACATATGCAAAGAGATTTCTCAGAATATTGAGGCACAAGAGGAGCTACTTATGCAAATCCAGGCCCAGAATGATCAATTCTCTGCTCTCTTTAATCTTGAAGATTACAAGGCTGCTCGGGACAGGTGCTGTAAGCAGATTGAAGCTGCCATAGCCAAGTACCGAGAAATTAAGGACAACATAAATGAGGGACTGAAGTTCTACGTAACCCTTCAGGATGCAATTACAAATGTAAAGCAACAGTGTAGTGATTTTGTGATGACAAGAAATATCCAATGTCGGGAAATGATAGAAGATGTGCAGAGGCAAATATCAGGTCTCAACTTCCAAGATAGGAACACAAACACTAACCAGAGCTACCCGTCAGTAGGACAGACTCATCAGCCTCCAAGAACAATGTCTCCGCAGCAAACAGAACCAGGAATGCCTCAAGCTTCGCGTCCACAAACACCCTATTACCAGCCTCCCCAGCATCCATCCATGCCTGGATATGGTGGTCCTTATGGTTCTTCGCAGCAGCCTCATCCTTCTCACTATCAGGCTCCACCTTCAGCAGGTACAATATACCCACCCCAGCAACCACACCAGCAACCACCTCCCAGCCATGAATATGGCCAACCTGCTTATCCTGGATGGCGGGGTCCGTACTATAATACACATTCTCAACAGCCTGCGTCCTTTCCCCGTCCACCATACACAGTTCCAGGGTCATACCCTCCTCATCAAAGTGGGTACTATAAGCAGCAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56170.p1 GENE.R_Transcript_56170~~R_Transcript_56170.p1 ORF type:complete len:871 (+),score=200.73,BRO1|PF03097.14|2.4e-107,BRO1|PF03097.14|6.6,ALIX_LYPXL_bnd|PF13949.2|8.2e+02,ALIX_LYPXL_bnd|PF13949.2|6.7e+02,ALIX_LYPXL_bnd|PF13949.2|1.6e-74 R_Transcript_56170:303-2915(+)
MASSTSSSSTTNIMLAIYEKKTTSIDLYRPLRNFIAFNYSEREAQNLEDDLETVKQLRPSLSLSSDSPPARRDLLTKYFKCLCLMETRFPISPDKDHINSIQFTWFDAFKQKQKSCQTNIHLEKAAVLFNLGAVYSQIGLSFDRSSVDGRKQAVHNFALAAGVFAYLRDNVAVKAAAGGAATVDVSVECAGMLERLMLAQAQECVFETTIAKGSTPGVCAKISRQVGIYYEEALAALNVAPLNSHFDKTWVAHVQLKAALFFAEACYRYSLELHEKEEIAEEIARLKTGISALSEVKRSAKGAPAQLLDAVSKLETSLNRNLERAMKENDRVYLQRVPPASSLSPLSAFSMVKPTPLDEVLDASKEKMFQSIVPDSSAKALSRYTEMVDDVIRTQAEKLQQGSELARVRLKEMDLPDSILAVEGNMSLPETLKEDVEAVQISGGPAGLESELQQLRDLKRVNQELLVQTEELLQKESQEDAQFRSQFGTRWTRPQSSTLTKNLQDRLNRFAGNLKQATDSDARIERSVRDNSALMSILDRHPIEAALPTLAKPIMSLDANEDAIVGALKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSTGSYEDLFRKEIAKYDHICKEISQNIEAQEELLMQIQAQNDQFSALFNLEDYKAARDRCCKQIEAAIAKYREIKDNINEGLKFYVTLQDAITNVKQQCSDFVMTRNIQCREMIEDVQRQISGLNFQDRNTNTNQSYPSVGQTHQPPRTMSPQQTEPGMPQASRPQTPYYQPPQHPSMPGYGGPYGSSQQPHPSHYQAPPSAGTIYPPQQPHQQPPPSHEYGQPAYPGWRGPYYNTHSQQPASFPRPPYTVPGSYPPHQSGYYKQQ*

Click here to download the sequence:
Link to NCBI Protein BLAST