Transcript Information: R_Transcript_56180.p1


Annotated TAIR IDAT1G15130.1
Annotated Gene NameEndosomal targeting BRO1-like domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:5206217-5209848 | Reverse length=846
E-Value4.6E-195
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.2192774066184
Replicate 22.8487442775882
Replicate 33.1655039391668
Condition 2: 8 Hour
Replicate 13.014591413103
Replicate 23.9890015344829
Replicate 37.0690945883417
Condition 3: 24 Hour
Replicate 14.4415858204352
Replicate 22.7153459438148
Replicate 32.8047058769642


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56180.p1 GENE.R_Transcript_56180~~R_Transcript_56180.p1 ORF type:3prime_partial len:398 (+),score=91.62,BRO1|PF03097.14|9.8e-62,BRO1|PF03097.14|1.5e-29 R_Transcript_56180:468-1658(+)
ATGTCTTTAAGGTATTCTTCTGCCTTAACCTCATCATCATCATCGACAACCAACATCATGCTCGCAATCTACGAGAAGAAAACAACCTCAATCGACCTCTACCGTCCTCTCCGCAACTTCATCGCCTTCAATTACTCAGAACGCGAAGCTCAAAACCTCGAAGACGATCTCGAAACCGTAAAGCAACTCCGTCCTTCTCTCTCCTTGTCCTCCGATTCACCTCCAGCTCGTCGAGACCTCCTAACCAAGTACTTCAAATGCCTTTGTTTGATGGAAACTCGGTTCCCAATTTCCCCTGATAAAGACCACATCAACTCAATCCAATTCACTTGGTTTGACGCCTTTAAGCAGAAGCAAAAATCTTGCCAGACTAATATCCATTTAGAGAAGGCTGCTGTGCTGTTTAATCTTGGGGCTGTTTATAGTCAGATTGGGCTTTCCTTTGATCGGTCTAGTGTTGATGGGAGGAAACAGGCTGTTCATAATTTTGCCCTAGCGGCTGGGGTTTTCGCTTATTTGAGGGATAATGTGGCGGTTAAGGCGGCCGCTGGTGGGGCTGCCACCGTTGATGTTTCGGTCGAGTGTGCCGGTATGTTGGAGAGGTTGATGCTTGCTCAGGCTCAGGAGTGTGTTTTTGAGACTACTATTGCTAAAGGGAGTACTCCTGGTGTTTGTGCCAAGATCTCTCGTCAGCTGAAAGCAGCTCTTTTTTTTGCCGAGGCTTGCTATAGGTACAGTTTAGAGCTTCATGAGAAAGAGGAGATTGCTGAAGAAATTGCTAGGTTGAAGACTGGGATTAGTGCTTTGTCAGAAGTGAAGAGATCAGCCAAAGGAGCTCCTGCACAACTTCTTGATGCTGTTAGTAAGCTGGAGACGAGTCTTAATCGTAATTTGGAGAGGGCAATGAAAGAGAATGATAGAGTGTACCTGCAAAGGGTCCCACCAGCCAGTTCTTTGTCACCTCTATCTGCATTCTCCATGGTAAAACCCACGCCTTTGGATGAAGTATTGGATGCCAGCAAAGAAAAGATGTTTCAATCAATTGTCCCAGACAGTAGTGCAAAGGCGCTATCAAGATACACTGAAATGGTTGATGATGTTATCAGAACACAGGCTGAGAAGCTACAGCAAGGAAGTGAGCTGGCTAGAGTGAGGCTTAAGGAAATGGACTTGCCTGATTCTATTCTTGCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56180.p1 GENE.R_Transcript_56180~~R_Transcript_56180.p1 ORF type:3prime_partial len:398 (+),score=91.62,BRO1|PF03097.14|9.8e-62,BRO1|PF03097.14|1.5e-29 R_Transcript_56180:468-1658(+)
MSLRYSSALTSSSSSTTNIMLAIYEKKTTSIDLYRPLRNFIAFNYSEREAQNLEDDLETVKQLRPSLSLSSDSPPARRDLLTKYFKCLCLMETRFPISPDKDHINSIQFTWFDAFKQKQKSCQTNIHLEKAAVLFNLGAVYSQIGLSFDRSSVDGRKQAVHNFALAAGVFAYLRDNVAVKAAAGGAATVDVSVECAGMLERLMLAQAQECVFETTIAKGSTPGVCAKISRQLKAALFFAEACYRYSLELHEKEEIAEEIARLKTGISALSEVKRSAKGAPAQLLDAVSKLETSLNRNLERAMKENDRVYLQRVPPASSLSPLSAFSMVKPTPLDEVLDASKEKMFQSIVPDSSAKALSRYTEMVDDVIRTQAEKLQQGSELARVRLKEMDLPDSILA

Click here to download the sequence:
Link to NCBI Protein BLAST