Transcript Information: R_Transcript_56190.p2


Annotated TAIR IDAT3G58060.1
Annotated Gene NameCation efflux family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:21497778-21499676 | Reverse length=411
E-Value6.7E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.449584598869
Replicate 27.0623919582093
Replicate 39.9956673146847
Condition 2: 8 Hour
Replicate 16.0101668506875
Replicate 28.1312297604311
Replicate 37.7556881741653
Condition 3: 24 Hour
Replicate 17.5134641836122
Replicate 26.8170800207239
Replicate 37.5612070736554


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56190.p2 GENE.R_Transcript_56190~~R_Transcript_56190.p2 ORF type:complete len:110 (+),score=13.08,ZT_dimer|PF16916.1|4.4e-14 R_Transcript_56190:1189-1518(+)
ATGAATGTCCGTTTTGCAGTTTCACTAGTAGGACAAACAGCTCCTCCTGAGGTCTTGCAGAAACTGGCATACCTTGTTATTCGACACCCTCAAGTCAAGCGTATTGACACCATTCGTGCTTACACTTTCGGTGTACTTTACTTTGTAGAGGTCGATATTGAGCTCCCTGAGGAAATCCCTTTAAAAGAAGCACACGCCATCGGAGAGACACTGCAGGATAACCTAGAGAAACTCCCTGAAGTCGAGCGAGCTTTTGTTCATTTAGATTATGAATGTGAACACAAACCAGAACACAAGGTTCTAAGTAGGCTGCCTAATACTGACCCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56190.p2 GENE.R_Transcript_56190~~R_Transcript_56190.p2 ORF type:complete len:110 (+),score=13.08,ZT_dimer|PF16916.1|4.4e-14 R_Transcript_56190:1189-1518(+)
MNVRFAVSLVGQTAPPEVLQKLAYLVIRHPQVKRIDTIRAYTFGVLYFVEVDIELPEEIPLKEAHAIGETLQDNLEKLPEVERAFVHLDYECEHKPEHKVLSRLPNTDP*

Click here to download the sequence:
Link to NCBI Protein BLAST