Transcript Information: R_Transcript_56193.p1


Annotated TAIR IDAT3G62240.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:23033592-23036653 | Reverse length=812
E-Value2.5E-285
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.122229303103
Replicate 212.38959444154
Replicate 316.065184771183
Condition 2: 8 Hour
Replicate 114.922461830002
Replicate 219.684065272531
Replicate 322.014589422307
Condition 3: 24 Hour
Replicate 118.460630963027
Replicate 214.961306212351
Replicate 318.76467064451


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56193.p1 GENE.R_Transcript_56193~~R_Transcript_56193.p1 ORF type:complete len:827 (+),score=161.26 R_Transcript_56193:291-2771(+)
ATGGATGATAGCTGCGCTGTATGTGCTGATGCCCTAGAATGGGTTGCTTACGGTCCCTGTGGTCATCGTGACGTCTGTTCCACTTGCGTCGCACGTCTCCGCTTCATCTGCGACGATCGCCGCTGTTGTATTTGCAAGACCGAATCCGACGTCGTTTTCGTCACCAAGGCACTAGGAGATTACACAACAATGGTGAATGACTTCTCGACATTGCCTGCACAACCAAAGGAGGGTAGGGTGGGGTCCTCTTACTGGTATCATGAGGATACTCAGGCCTTCTTCGATGATATTGAGCACTACAAGATGATCAAGGCCATGTGCAGGCTGTCCTGTAGTGTTTGTGACAAAATGGAGGAACCTTCCCAAGACGGGTTTCGGAGGCGTCAGAGGTTTCGGAATATTGGCCAGCTTAAGGGTCATTTGTCTCACCAACATAGGCTCTTCATGTGTGACCTTTGTTTAGAAGGAAGGAAGGTATTCGTGTGTGAGCAAAAGCTCTATACTAGAGCACAATTGAATCAACATAAAAGGACAGGAGATTCAGAGGTTGATGGAACAGAAAGTGAAAGAGGAGGTTTTACTGGTCATCCTATGTGCGACTTTTGTCATACCTCATTCTATGGAGAGAATGAGCTATACACTCATATGTCGAGGGAGCACTTCACTTGTCATATTTGTCAAAGGCGACATCCTGGACAATATGAATATTATAAGGACTACGATGACTTAGAGTCTCATTTTCGCAATGACCACTTTTTGTGTGAAGATGAAGAATGCCTTAGAAAGAAGTTCATTGTGTTTCAAACAGAAGCTGATATAAAGAGGCATAATGCATTGGAGCATGGAGGCCGTATGTCAAGATCCAAGCGAAATGCTGTTCTCCAGATACCAACTAGCTTTAGATACCGAAGTAATAACGAGTCAGGACATCATCGTGGAAGGAGGCGGACCTTTCGCCGAGAGTCTTCTCCAGACAATGAGCTTAGTATGGCTATACAAGCCAGTCTTGAGGGGATTAATGGTGGAGGTGCATTGCCTGATCCATCACCATCATCGGTTGCTGCACCGTGTGTTCGTGATGATGCAGATGCAAGTGATATCGATCCCCTTGTGCAGCCATTTGAATCACTAAGCACAAGTGATTCTGAACCATCTGCAAGATACCGTCAGGCTGTGTCTCAGAGCTCAATTGGTGCACCTCTTGCTGAATCTTCCTTCCCTCCCCTATCAGCTGCATCCAGCTCCCAGCAAAAATCTCAGCAAGAATTAGAAGGGTTGACTCAGAACACTATGGCAACACGAATACGTCGTCAAAACAATGCAGCTGTTCTAAATGTTGCCAGGTCTACACCAGCTAAAAACCGTGGACTTGCTCCTGCTACTACGGGGTCCTGGCCTGCTCCGGTTCCATCCCAAGCTGCTGTCCAAATCAAACCCGCAGCAGCCACTGCTTCTGGTTCATCTAGACCTAGTTATGCTAGTTCTAAACAAGTTCGACAAGTAACTGAACCTGGCTTTGCAGCGGGTGGTTCATGGGCTTCTAGAAATCCTGTGAGTGGCGTTAGGTTAAACCACTCAAGCTCAGCTCCTAACCTCATAGAAACTAGGTCATTTGATCCAGTATCTGATTTCCCTCCGGTCTTGGCAGCACAATCCAACAGGCAAAAGATTAGTGGCGAATCCACAAAAACAAAAAATGATGTCCAAACTGCCAACAAATCTCTTGTAGAGCAGATTCGGGCTGCTCTTGGTAATGATGAAGATAAATACAACGCCTTCAAAGAGATCTCTCAAGAGTATCGCCAGGGTTTAATAGACACATTTGAATATCTTGAATATGTAAAACAATTTGACTTGACACATCTTGTACTGGATTTGGCCAGACTATGCCCTGATAATCAGAAGCAAAGGGAGCTTATAGATGCTTATAATGCAAGTCAGCGTAGTGAATCACAAGAACCATTTTGGGGCAATGGAAACCTTCATACTAAGGGAAGTAGTAGCTCAAGAAAGGACAAAGGAAAGAAGGTGATCTTATCTGAGAACAACAATCCAAAGGAGGCCTTAGCAGATAGCATCATCAATACTGTAAGGACTTTGCAATCTCAGGTCAAGCCTATTGAGGGAGAGGTGGAGGTTCTGCAGAAAGATGGTTATCGAACTAACAAAGGGAAATCACTGGCAATAGTTGGTGAGAATCCACTTGAACGTGGTGGTGCTAAGCCGCATCCTGCACAGCCAACTGGGAGCATAGCTGGTCAAACTTCAGGAGATGGGGGAGTAGGAAGCAAGCAGAAAAAGAAGACCTCAAAATTCCATAGAGTTCGCTTGGGTGATACCTCGCCAGCAGCTGTGCTAGGTGCCAAAAGTTCTGCTGATCCTAGTCCAGCAGAGGCGGACACCACTTCAGCTTGGCCGAATGCAACGCGTGGACGTGGTGTTTGGAGTAGTGGAGGTGGTCAGAGATTATTTGGAAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56193.p1 GENE.R_Transcript_56193~~R_Transcript_56193.p1 ORF type:complete len:827 (+),score=161.26 R_Transcript_56193:291-2771(+)
MDDSCAVCADALEWVAYGPCGHRDVCSTCVARLRFICDDRRCCICKTESDVVFVTKALGDYTTMVNDFSTLPAQPKEGRVGSSYWYHEDTQAFFDDIEHYKMIKAMCRLSCSVCDKMEEPSQDGFRRRQRFRNIGQLKGHLSHQHRLFMCDLCLEGRKVFVCEQKLYTRAQLNQHKRTGDSEVDGTESERGGFTGHPMCDFCHTSFYGENELYTHMSREHFTCHICQRRHPGQYEYYKDYDDLESHFRNDHFLCEDEECLRKKFIVFQTEADIKRHNALEHGGRMSRSKRNAVLQIPTSFRYRSNNESGHHRGRRRTFRRESSPDNELSMAIQASLEGINGGGALPDPSPSSVAAPCVRDDADASDIDPLVQPFESLSTSDSEPSARYRQAVSQSSIGAPLAESSFPPLSAASSSQQKSQQELEGLTQNTMATRIRRQNNAAVLNVARSTPAKNRGLAPATTGSWPAPVPSQAAVQIKPAAATASGSSRPSYASSKQVRQVTEPGFAAGGSWASRNPVSGVRLNHSSSAPNLIETRSFDPVSDFPPVLAAQSNRQKISGESTKTKNDVQTANKSLVEQIRAALGNDEDKYNAFKEISQEYRQGLIDTFEYLEYVKQFDLTHLVLDLARLCPDNQKQRELIDAYNASQRSESQEPFWGNGNLHTKGSSSSRKDKGKKVILSENNNPKEALADSIINTVRTLQSQVKPIEGEVEVLQKDGYRTNKGKSLAIVGENPLERGGAKPHPAQPTGSIAGQTSGDGGVGSKQKKKTSKFHRVRLGDTSPAAVLGAKSSADPSPAEADTTSAWPNATRGRGVWSSGGGQRLFGK*

Click here to download the sequence:
Link to NCBI Protein BLAST