Transcript Information: R_Transcript_56220.p1


Annotated TAIR IDAT4G13730.1
Annotated Gene NameYpt/Rab-GAP domain of gyp1p superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:7970299-7974055 | Forward length=449
E-Value1.9E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.1407179943575
Replicate 23.4021783081964
Replicate 33.9768641659987
Condition 2: 8 Hour
Replicate 12.4939306890713
Replicate 24.3997105474555
Replicate 35.0841316783954
Condition 3: 24 Hour
Replicate 15.7925948792124
Replicate 24.2374687220322
Replicate 34.3066085610793


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56220.p1 GENE.R_Transcript_56220~~R_Transcript_56220.p1 ORF type:complete len:432 (+),score=75.71,RabGAP-TBC|PF00566.14|0.56,RabGAP-TBC|PF00566.14|1.4e-26 R_Transcript_56220:379-1674(+)
ATGGTGAATGTGAATCAGAAAGAGAAGCCATCGCCGAAGAAGGTTCCAGATTGGTTGAATTCCTCCATGTGGTCATCCCCTCCACCTCCCATCCCTCCGCCGGAAGAATCCCCCCGTCGCTCCATTTCCGGCAACTTCAGCGACTCCGATTCTCCCACTACGACCACACGTGTCCCTCCGGCGCCACATCAGCCTCCAATTCGGCCCGATCCTCCCCCTCCTCCCCCTTCCAAGTCCAATGGCAATGGCAATGACACCTCCACGTCGAACTCCAACTCCTTAGCCTCCACGTCATCATCGTCAACTTCCGCTCTCTCTGCCGAGGAGATCTCTCGCCAAGCCCAGCTCTTAGTCGAGGTGTCCAAGAAGGTGATAAATATGCGGGAAGTGAGGAGACTGGCGTCGATGGGGATACCTGATGGGCCTAGTCCTGGCAATGCAGGAGTCCGTTCTACAGTTTGGAAGCTTCTCTTGGGGTATTTGCCCTCTGAACGCTCCTTGTGGTCTTCTGAACTGTCCAAAAAACGCTCTCAATATAAGCATTTCAAGGACGATCTCTTGATGTCTCCCTCAGAGATTACGAGGAGGTTGGAGAAGTCGGCTAGCCTTGAAACGGACGAGCTCAAAGGCGACAGTCGTTGTGTGCTCTCCAGATCCGAAGTTACACATGGAGAACATCCTTTAAGCCTTGGCCAGTCTAGTGTTTGGAATCAATTTTTTCAGGACACAGAGATAATAGAGCAAATTGATCGGGACGTGAAACGCACTCACCCAGATATGCAATTCTTCTCTGGTGACACTACTTCTGCCAACTTAAATCAGGAGGCTTTGAGGAACATATTGATGGTGTTTGCAAAGCTAAACCCCGGAATAAGATATGTGCAAGGAATGAATGAAATCCTAGCACCTCTCTTCTATGTTTTCAGGAATGATCCTGATGAGGAAAATGCGGCTGCTGCCGAAGCAGATACATTCTTTTGTTTTGTTGAGCTGCTGAGTGGGTTCAGGGATAATTTCTGCCAGCAACTTGATAACAGTGTTGTGGGAATCCGTTCCACAATTACAAAGTTGTCACTACTTTTGAAGGAACACGATGAAGAGCTTTGGCGTCATTTGGAGGTGACATGCAAGGAAACATTGCTAAGGATCTGTTGTGCAATGCTGATTCTTATCCGGAGACGGTTGTTGGCTGGTGATTTTACTTCCAATCTCAAGTTGTTGCAAAACTATCCTTCAACAAATATTAGCCATCTATTATATGTTGCAAACAAGTTAAGGGCTCATCCGACTAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56220.p1 GENE.R_Transcript_56220~~R_Transcript_56220.p1 ORF type:complete len:432 (+),score=75.71,RabGAP-TBC|PF00566.14|0.56,RabGAP-TBC|PF00566.14|1.4e-26 R_Transcript_56220:379-1674(+)
MVNVNQKEKPSPKKVPDWLNSSMWSSPPPPIPPPEESPRRSISGNFSDSDSPTTTTRVPPAPHQPPIRPDPPPPPPSKSNGNGNDTSTSNSNSLASTSSSSTSALSAEEISRQAQLLVEVSKKVINMREVRRLASMGIPDGPSPGNAGVRSTVWKLLLGYLPSERSLWSSELSKKRSQYKHFKDDLLMSPSEITRRLEKSASLETDELKGDSRCVLSRSEVTHGEHPLSLGQSSVWNQFFQDTEIIEQIDRDVKRTHPDMQFFSGDTTSANLNQEALRNILMVFAKLNPGIRYVQGMNEILAPLFYVFRNDPDEENAAAAEADTFFCFVELLSGFRDNFCQQLDNSVVGIRSTITKLSLLLKEHDEELWRHLEVTCKETLLRICCAMLILIRRRLLAGDFTSNLKLLQNYPSTNISHLLYVANKLRAHPTS*

Click here to download the sequence:
Link to NCBI Protein BLAST