Transcript Information: R_Transcript_56223.p1


Annotated TAIR IDAT4G13730.1
Annotated Gene NameYpt/Rab-GAP domain of gyp1p superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:7970299-7974055 | Forward length=449
E-Value2.7E-212
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.1264804773594
Replicate 28.0070637180798
Replicate 37.2796835580993
Condition 2: 8 Hour
Replicate 17.418387049695
Replicate 25.5902204602964
Replicate 38.6143236842514
Condition 3: 24 Hour
Replicate 110.457475749908
Replicate 28.2707220839665
Replicate 38.1151447462013


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56223.p1 GENE.R_Transcript_56223~~R_Transcript_56223.p1 ORF type:complete len:472 (+),score=77.46,RabGAP-TBC|PF00566.14|0.63,RabGAP-TBC|PF00566.14|4.1e-42 R_Transcript_56223:301-1716(+)
ATGGTGAATGTGAATCAGAAAGAGAAGCCATCGCCGAAGAAGGTTCCAGATTGGTTGAATTCCTCCATGTGGTCATCCCCTCCACCTCCCATCCCTCCGCCGGAAGAATCCCCCCGTCGCTCCATTTCCGGCAACTTCAGCGACTCCGATTCTCCCACTACGACGACACGTGTCCCTCCGGTGCCACGTCAGCCTCTAGCTCGGCCCGATCCTCCCCCTTCCAAGTCCAAGTCCAAGTCCAATGGCAATGGCAATGACACCTCCACGTCGAACTCCAACTCCTTAGCCTCCACGTCATCATCGTCAACTTCCGCTCTCTCTGCCGAGGAGATCTCTCGCCAAGCCCAGCTCTTAGTCGAGGTGTCCAAGAAGGTGATAAATATGCGGGAAGTGAGGAGACTGGCGTCGATGGGGATACCTGATGGGCCTAGTCCTGGCAATGCAGGAGTCCGTTCTACAGTTTGGAAGCTTCTCTTGGGGTATTTGCCCTCTGAACGCTCCTTGTGGTCTTCTGAACTGTCCAAAAAACGCTCTCAATATAAGCATTTCAAGGACGATCTCTTGATGTCTCCCTCAGAGATTACGAGGAGGTTGGAGAAGTCGGCTAGCCTTGAAACGGACGAGCTCAAAGGCGACAGTCGTTGTGTGCTCTCCAGATCCGAAGTTACACATGGAGAACATCCTTTAAGCCTTGGCCAGTCTAGTGTTTGGAATCAATTTTTTCAGGACACAGAGATAATAGAGCAAATTGATCGGGACGTGAAACGCACTCACCCAGATATGCAATTCTTCTCTGGTGACACTACTTCTGCCAACTTAAATCAGGAGGCTTTGAGGAACATATTGATGGTGTTTGCAAAGCTAAACCCCGGAATAAGATATGTGCAAGGAATGAATGAAATCCTAGCACCTCTCTTCTATGTTTTCAGGAATGATCCTGATGAGGAAAATGCGGCTGCTGCCGAAGCAGATACATTCTTTTGTTTTGTTGAGCTGCTGAGTGGGTTCAGGGATAATTTCTGCCAGCAACTTGATAACAGTGTTGTGGGAATCCGTTCCACAATTACAAAGTTGTCACTACTTTTGAAGGAACACGATGAAGAGCTTTGGCGTCATTTGGAGGTGACATGCAAGATCAATCCGCAGTTTTATGCATTTAGATGGATAACTCTCCTCTTGACTCAAGAATTCAGCTTCGTGGATAGCCTTCATATTTGGGATACTCTGCTAAGTGATCCTGAAGGGCCTCAGGAAACATTGCTAAGGATCTGTTGTGCAATGCTGATTCTTATCCGGAGACGGTTGTTGGCTGGTGATTTTACTTCCAATCTCAAGTTGTTGCAAAACTATCCTTCAACAAATATTAGCCATCTATTATATGTTGCAAACAAGTTAAGGGCTCATCCGACTAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56223.p1 GENE.R_Transcript_56223~~R_Transcript_56223.p1 ORF type:complete len:472 (+),score=77.46,RabGAP-TBC|PF00566.14|0.63,RabGAP-TBC|PF00566.14|4.1e-42 R_Transcript_56223:301-1716(+)
MVNVNQKEKPSPKKVPDWLNSSMWSSPPPPIPPPEESPRRSISGNFSDSDSPTTTTRVPPVPRQPLARPDPPPSKSKSKSNGNGNDTSTSNSNSLASTSSSSTSALSAEEISRQAQLLVEVSKKVINMREVRRLASMGIPDGPSPGNAGVRSTVWKLLLGYLPSERSLWSSELSKKRSQYKHFKDDLLMSPSEITRRLEKSASLETDELKGDSRCVLSRSEVTHGEHPLSLGQSSVWNQFFQDTEIIEQIDRDVKRTHPDMQFFSGDTTSANLNQEALRNILMVFAKLNPGIRYVQGMNEILAPLFYVFRNDPDEENAAAAEADTFFCFVELLSGFRDNFCQQLDNSVVGIRSTITKLSLLLKEHDEELWRHLEVTCKINPQFYAFRWITLLLTQEFSFVDSLHIWDTLLSDPEGPQETLLRICCAMLILIRRRLLAGDFTSNLKLLQNYPSTNISHLLYVANKLRAHPTS*

Click here to download the sequence:
Link to NCBI Protein BLAST