Transcript Information: R_Transcript_56224.p1


Annotated TAIR IDAT1G04830.2
Annotated Gene NameYpt/Rab-GAP domain of gyp1p superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:1358782-1361844 | Reverse length=459
E-Value6.9E-128
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.98315584739
Replicate 27.1816324464297
Replicate 36.7468775817646
Condition 2: 8 Hour
Replicate 16.5722155321584
Replicate 28.3919699071433
Replicate 35.8637031932841
Condition 3: 24 Hour
Replicate 16.8709826857262
Replicate 26.3389223889783
Replicate 35.9268368985898


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56224.p1 GENE.R_Transcript_56224~~R_Transcript_56224.p1 ORF type:complete len:421 (+),score=74.48,RabGAP-TBC|PF00566.14|2.1e-49 R_Transcript_56224:301-1563(+)
ATGGTGAATGTGAATCAGAAAGAGAAGCCATCGCCGAAGAAGGTTCCAGATTGGTTGAATTCCTCCATGTGGTCATCCCCTCCACCTCCCATCCCTCCGCCGGAAGAATCCCCCCGTCGCTCCATTTCCGGCAACTTCAGCGACTCCGATTCTCCCACTACGACGACACGTGTCCCTCCGGTGCCACGTCAGCCTCTAGCTCGGCCCGATCCTCCCCCTTCCAAGTCCAAGTCCAAGTCCAATGGCAATGGCAATGACACCTCCACGTCGAACTCCAACTCCTTAGCCTCCACGTCATCATCGTCAACTTCCGCTCTCTCTGCCGAGGAGATCTCTCGCCAAGCCCAGCTCTTAGTCGAGGTGTCCAAGAAGGTGATAAATATGCGGGAAGTGAGGAGACTGGCGTCGATGGGGATACCTGATGGGCCTAGTCCTGGCAATGCAGGAGTCCGTTCTACAGTTTGGAAGCTTCTCTTGGGGTATTTGCCCTCTGAACGCTCCTTGTGGTCTTCTGAACTGTCCAAAAAACGCTCTCAATATAAGCATTTCAAGGACGATCTCTTGATGTCTCCCGACACAGAGATAATAGAGCAAATTGATCGGGACGTGAAACGCACTCACCCAGATATGCAATTCTTCTCTGGTGACACTACTTCTGCCAACTTAAATCAGGAGGCTTTGAGGAACATATTGATGGTGTTTGCAAAGCTAAACCCCGGAATAAGATATGTGCAAGGAATGAATGAAATCCTAGCACCTCTCTTCTATGTTTTCAGGAATGATCCTGATGAGGAAAATGCGGCTGCTGCCGAAGCAGATACATTCTTTTGTTTTGTTGAGCTGCTGAGTGGGTTCAGGGATAATTTCTGCCAGCAACTTGATAACAGTGTTGTGGGAATCCGTTCCACAATTACAAAGTTGTCACTACTTTTGAAGGAACACGATGAAGAGCTTTGGCGTCATTTGGAGGTGACTTGCAAGATCAATCCTCAGTTTTATGCATTTAGATGGATAACTCTCCTCTTGACTCAAGAATTCAGCTTCGTGGATAGCCTTCATATTTGGGATACTCTGCTAAGTGATCCTGAAGGGCCTCAGGAAACATTGCTAAGGATCTGTTGTGCAATGCTGATTCTTATCCGGAGACGGTTGTTGGCTGGTGATTTTACTTCCAATCTCAAGTTGTTGCAAAACTATCCTTCAACAAATATTAGCCATCTATTATATGTTGCAAACAAGTTAAGGGCTCATCCGACTAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56224.p1 GENE.R_Transcript_56224~~R_Transcript_56224.p1 ORF type:complete len:421 (+),score=74.48,RabGAP-TBC|PF00566.14|2.1e-49 R_Transcript_56224:301-1563(+)
MVNVNQKEKPSPKKVPDWLNSSMWSSPPPPIPPPEESPRRSISGNFSDSDSPTTTTRVPPVPRQPLARPDPPPSKSKSKSNGNGNDTSTSNSNSLASTSSSSTSALSAEEISRQAQLLVEVSKKVINMREVRRLASMGIPDGPSPGNAGVRSTVWKLLLGYLPSERSLWSSELSKKRSQYKHFKDDLLMSPDTEIIEQIDRDVKRTHPDMQFFSGDTTSANLNQEALRNILMVFAKLNPGIRYVQGMNEILAPLFYVFRNDPDEENAAAAEADTFFCFVELLSGFRDNFCQQLDNSVVGIRSTITKLSLLLKEHDEELWRHLEVTCKINPQFYAFRWITLLLTQEFSFVDSLHIWDTLLSDPEGPQETLLRICCAMLILIRRRLLAGDFTSNLKLLQNYPSTNISHLLYVANKLRAHPTS*

Click here to download the sequence:
Link to NCBI Protein BLAST