Transcript Information: R_Transcript_56246.p1


Annotated TAIR IDAT1G75980.1
Annotated Gene NameSingle hybrid motif superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:28522936-28524302 | Reverse length=225
E-Value4.5E-47
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3044153452508
Replicate 27.9641139510096
Replicate 37.7014031573271
Condition 2: 8 Hour
Replicate 18.0212316206493
Replicate 25.9757529058341
Replicate 37.8239700949944
Condition 3: 24 Hour
Replicate 111.676815745125
Replicate 29.8868401923277
Replicate 39.0569812497506


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56246.p1 GENE.R_Transcript_56246~~R_Transcript_56246.p1 ORF type:complete len:116 (-),score=6.70,GCV_H|PF01597.15|1.5e-06 R_Transcript_56246:137-484(-)
ATGATCAGTATGTGTATCGTCATGCTAATGGATTTTAATGTTGGTAAGGCTGACCGGAGTGAATTCAAGGTCACTGGCAAGCGCAAGAAGAATGCGCAACATTTCCAGCCGAATAGTATATTGTGCAATGTCTGTAGTGGTGATTCGTCCTACATCGTGAGGTGTTGTGTTAAAGGCTCATTGCTTGAAGTCAACACTCGATTGATCCAGAATCCAGGACTGCTTAACACATCGGCTGATAGGGATGCTTACATAGCGATTGTTATGCCAAAACCTGTAGATTGGTTGAAGATCAAGGAATCACTCGTGACGTTCGAAGAGTATAAGAAATTAAGGGAACTGAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56246.p1 GENE.R_Transcript_56246~~R_Transcript_56246.p1 ORF type:complete len:116 (-),score=6.70,GCV_H|PF01597.15|1.5e-06 R_Transcript_56246:137-484(-)
MISMCIVMLMDFNVGKADRSEFKVTGKRKKNAQHFQPNSILCNVCSGDSSYIVRCCVKGSLLEVNTRLIQNPGLLNTSADRDAYIAIVMPKPVDWLKIKESLVTFEEYKKLRELS*

Click here to download the sequence:
Link to NCBI Protein BLAST