Transcript Information: R_Transcript_56248.p1


Annotated TAIR IDAT1G75980.1
Annotated Gene NameSingle hybrid motif superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:28522936-28524302 | Reverse length=225
E-Value5.9E-86
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.429424149216
Replicate 29.6151282280243
Replicate 38.0280622416422
Condition 2: 8 Hour
Replicate 19.8401139507621
Replicate 29.1951289814221
Replicate 311.87488545259
Condition 3: 24 Hour
Replicate 112.980816236225
Replicate 211.955187062182
Replicate 312.478037251409


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56248.p1 GENE.R_Transcript_56248~~R_Transcript_56248.p1 ORF type:complete len:214 (+),score=27.09,GCV_H|PF01597.15|1e-05 R_Transcript_56248:131-772(+)
ATGGCGAACAGTGAAACAGTAAGAGCAAGAGCAACCCAGGATGATGATGCCCAACCCCAAATTCAATTACTCAATACTCACGAAACCCCCCAAGAAGAAGAAAATGAAGAACAAGAGTTGAAGAGAATGTTGACGATTGATATCTCCAATCTTCCTCTTTCTCCTCTTTCTATGGTTGAAACGAATTTCGTCAGATATTTCGCCCCAGATTTCATGAAGCCAGGACATGATCAGTATGTGTATCGTCATGCTAATGGGTTGTGTGTGATTGGATTGGCACCAACCCATGTTGGCCTACAAGCTGAAGGAGGTGTTACTTCTGTAGATTTTAATGTTGGTAAGGCTGACCGGAGTGAATTCAAGGTCACTGGCAAGCGCAAGAAGAATGCGCAACATTTCCAGCCGAATAGTATATTGTGCAATGTCTGTAGTGGTGATTCGTCCTACATCGTGAGGTGTTGTGTTAAAGGCTCATTGCTTGAAGTCAACACTCGATTGATCCGGAATCCGGGACTGCTTAACACATCGGCTGATAGGGATGCTTACATAGCGATTGTTATGCCAAAACCTGTAGATTGGTTGAAGATCAAGGAATCACTCGTGACGTTCGAAGAGTATAAGAAATTAAGGGAACTGAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56248.p1 GENE.R_Transcript_56248~~R_Transcript_56248.p1 ORF type:complete len:214 (+),score=27.09,GCV_H|PF01597.15|1e-05 R_Transcript_56248:131-772(+)
MANSETVRARATQDDDAQPQIQLLNTHETPQEEENEEQELKRMLTIDISNLPLSPLSMVETNFVRYFAPDFMKPGHDQYVYRHANGLCVIGLAPTHVGLQAEGGVTSVDFNVGKADRSEFKVTGKRKKNAQHFQPNSILCNVCSGDSSYIVRCCVKGSLLEVNTRLIRNPGLLNTSADRDAYIAIVMPKPVDWLKIKESLVTFEEYKKLRELS*

Click here to download the sequence:
Link to NCBI Protein BLAST