Transcript Information: R_Transcript_56257.p1


Annotated TAIR IDAT2G42010.1
Annotated Gene Namephospholipase D beta 1
Annotated Gene Symbol(s)PLDBETA1, PLDBETA
Annotation TypeOrtholog
Chromosome Positionchr2:17533018-17537990 | Reverse length=1083
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.432178632412
Replicate 212.399089144838
Replicate 316.320268915184
Condition 2: 8 Hour
Replicate 114.103323486448
Replicate 216.07379131441
Replicate 323.849795937979
Condition 3: 24 Hour
Replicate 120.764386154993
Replicate 216.757180321776
Replicate 320.274507162203


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56257.p1 GENE.R_Transcript_56257~~R_Transcript_56257.p1 ORF type:complete len:1099 (+),score=185.98,PLD_C|PF12357.4|6.2e-28,C2|PF00168.26|1.1e-25,PLDc|PF00614.18|8.8e-10,PLDc|PF00614.18|1.3e-06,PLDc_2|PF13091.2|7.4e+03,PLDc_2|PF13091.2|8.5,PLDc_2|PF13091.2|16,PLDc_2|PF13091.2|7.9e-06 R_Transcript_56257:716-4012(+)
ATGGATAACTATGGCTCTTCACATCCTTACCCTTATGGTTACTCACCATCTTACCCTTATGGTTACCCACCACCCCCAAATCAGCCATACCCACCACCCCCAAATCAGCCATACCCACCACCCCCAAATCAGCCATACCCACCATCCCCACCTCATAACTCAGATGTTTACCCGCCGCCACCTCCACACCCTGCTTACCCATATCCATATGCTGGCCCGTATTCGTACCCATATCCACCACCAGCATACCCAAATCCATACCCACCATATGCACAACCCCAACCCCAACCCCAACCACCCACTTATCCAATTCCATCCCCTAGATCTCTCTCCTATTCTGGTCCTCTTCCACAGACTAGTGCATCCCCACCAAGCCTTCAACATAGTGGTAGTTTTCAGCATCATTATCATCACTATTCTAGCTCAGGTCCATACCCTCCCCCAGTTGCTGCTGATCCTCCTCCTCAGCCGCCTTTGCGTACTAGTAGTTTATCAAGTAGTGCAAGATATGATCATGTCTCTAGTGGATTGAGTTCTAGTGGTGAAAACAGTTTTGACCATAGGCACTCAGCATATCCACCTGTGGAGAACCTTATGGCTGATATGCATCTTTCTGATACTCGCCCATCTGTCCCTGCATCACCTCCTGCACCTGCCATGGTAGAAACCAGCTTACCTCTCGCATATCCCGGTTCAAGTGGGGAGTTTAGTTATCATGAGAGCTATTATGGGACCAGATCTAGAAGTCCTAGTTGGGATGGGTGTTTCTCTTGCAGGGGTGAAGATGATTCTCCACGTTCCCCATCGCAGAATATGCAGCTTGTTCCCCATCATTCAGGGTCGTTAAAGGTTTTGCTTTTGCATGGGAATTTAGACATATGGGTTTACGAGGCTAAGAACCTTCCAAACTTGGACATGTTTCATAAAACGTTGGGTGAGATGTTTTGGAAGGCAAACAAAACTGACGGACAAGGGAGTCGTAAGATCACAAGTGATCCATACGTGTCAATAACAGTGTCCAATGCTGTGATTGGGAGGACTTATGTGATTGGCAATGAAGAGAATCCCGTGTGGATGCAACACTTTAATGTACCAGTGGCACATCGTGCTGCTGAGGTACATTTCTTGGTCAAGGATAGTGATGTTGTAGGATCCCAGCTCATAGGAAGTGTATCGATTCCTGTGGAACAGATATATGCAGGGGCAAAAGTTGAAGGCACGTATCCTATCCTGAATGCTAGTGGGAAACAATGTAAGGCTGGAGCTGTGTTAACACTTTCGATTCAATATACACCTATCAGAAACCTATGTATTTACCACCATGGAGTTGGTGCTGGCCCTGATTATCAAGGCGTACCTGGTACATACTTTCCTCTTAGAAGAGGTGGCTCGCTTACTCTCTACCAGGATGCCCATGTCCCTGATGGTTGCCTTCCTGATTTTACCCTTGATTATGGAAGGAAATATGTACATGGCAAGTGTTGGCAAGACATTTTTGATGCAATACGACAAGCTAGGCGGTTGATATATATTACTGGTTGGTCAGTTTGGCATAAAGTTAGACTAGTACGTGATAATGTCAATTCCTCATCAGATTGCACCCTCGGAGAACTTCTCAGGTCAAAGTCGGCAGAGGGAGTGAGAGTTCTGCTGCTTGTGTGGGATGATCCTACTTCAAGAAGCATCTTGGGCTATAAAACAGATGGAATCATGGCTACCCATGACGAGGAGACTCGCCGTTTCTTTAAGCACTCCTCTGTGCAGGTCCTGCTTTGCCCTCGCGTTGCTGGAAAAAGACATAGCTGGGTCAAACAAAGGGAAGTTTCTACAATCTATACTCACCACCAAAAAACTGTGATACTTGATGCTGATGCTGGCAACAATAGAAGAAAAATCATAGCTTTTGTTGGCGGCCTTGACTTGTGTGACGGGAGATATGATACTCCTCAGCATCCCCTATTCAGAACTCTGCAAACAGTGCACAATGATGACTATCACAATCCTTCCTACCAAGGCAATACTACTGGCTGCCCGAGAGAACCGTGGCATGATTTACATTGTAAAATTGATGGACCTGCTGCCTATGATGTTCTAACAAACTTTGAGGAACGATGGGTTAAGGCTTCTAAGCCACATGGGATTAAAAAGTTGAAAAAGGCTTACGATGATGCTTTACTAAGAATTGAACGGTTGCCCGACATTCATGGTATATCTGATGCTCCTTGGCTTAGTGAAGATGATCCAGAATCCTGGCATGTACAGGTTTTCCGGTCTATTGATTCCAGCTCTGTTAAAGGATTTCCGAAGAACCCAAAGGAAGCTACTAGCAAGAATTTGGTATGTGGGAAGAATGTGCTGATTGACATGAGCATACATACAGCTTATGTGAAGGCTATACGATCTGCCCAGCATTACATATATATAGAGAATCAGTATTTCATTGGTTCTTCGTACAATTGGAATGCCCACAGGGACTTAGGAGCTAATAATTTGATTCCCATGGAAATTGCTCTCAAAATTGCTGACAAGATCAGAGCTCATGAGCGATTTGCTGCATACATTGTAATCCCAATGTGGCCAGAGGGTATCCCAAGTGGCAGCGCCACTCAAAGGATTCTTTATTGGCAGAACAAGACAATGCAAATGATGTATGAGACAATTTACAAGGCTCTAGTGGAGGTGGGTCTTGAGGAAGCATTCACACCACAAGATTATTTGAACTTCTTCTGCCTTGGTAATCGCGAAGTTCCAGATGGAAGTCATTCTGCAGGATCTGGAAGTATTCATCCACCTAACAGTCCCCAAGCTCTCTGTCTAAAGAACCGAAGATTCATGATCTATGTGCATTCAAAAGGCATGATAGTGGACGATGAGTATGTGATTTTGGGTTCTTCAAATATCAACCAGCGGTCAATGGAGGGAACAAGAGACACTGAGATTGCAATGGGGGCCTACCAGCCTCATTACACTTGGGCGAGAAAGTCAGCTCATCCGAAAGGACAGATATATGGTTATAGGATGTCTCTTTGGGCAGAGCACCTTGGACTTGTTGATGATTGCTTCAATGAACCCGAAAGTATAGAATGTGTAAGGAAAGTGAGAACTTTGTCAGAGATGAACTGGAAACAATTTGCTGCTGAAAGTGTGACAGAAATGGCAGGCCACCTCCTAAAGTACCCGGTTGATGTTGATCGGAGGGGCAAGGTCAGGCCTCTCCTAGGATCTGAAAGTTTCCCCGATCTTGGTGGGAATATATGCGGCTCCTTCCTTGGAATTCAAGAAAACGTTACGATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56257.p1 GENE.R_Transcript_56257~~R_Transcript_56257.p1 ORF type:complete len:1099 (+),score=185.98,PLD_C|PF12357.4|6.2e-28,C2|PF00168.26|1.1e-25,PLDc|PF00614.18|8.8e-10,PLDc|PF00614.18|1.3e-06,PLDc_2|PF13091.2|7.4e+03,PLDc_2|PF13091.2|8.5,PLDc_2|PF13091.2|16,PLDc_2|PF13091.2|7.9e-06 R_Transcript_56257:716-4012(+)
MDNYGSSHPYPYGYSPSYPYGYPPPPNQPYPPPPNQPYPPPPNQPYPPSPPHNSDVYPPPPPHPAYPYPYAGPYSYPYPPPAYPNPYPPYAQPQPQPQPPTYPIPSPRSLSYSGPLPQTSASPPSLQHSGSFQHHYHHYSSSGPYPPPVAADPPPQPPLRTSSLSSSARYDHVSSGLSSSGENSFDHRHSAYPPVENLMADMHLSDTRPSVPASPPAPAMVETSLPLAYPGSSGEFSYHESYYGTRSRSPSWDGCFSCRGEDDSPRSPSQNMQLVPHHSGSLKVLLLHGNLDIWVYEAKNLPNLDMFHKTLGEMFWKANKTDGQGSRKITSDPYVSITVSNAVIGRTYVIGNEENPVWMQHFNVPVAHRAAEVHFLVKDSDVVGSQLIGSVSIPVEQIYAGAKVEGTYPILNASGKQCKAGAVLTLSIQYTPIRNLCIYHHGVGAGPDYQGVPGTYFPLRRGGSLTLYQDAHVPDGCLPDFTLDYGRKYVHGKCWQDIFDAIRQARRLIYITGWSVWHKVRLVRDNVNSSSDCTLGELLRSKSAEGVRVLLLVWDDPTSRSILGYKTDGIMATHDEETRRFFKHSSVQVLLCPRVAGKRHSWVKQREVSTIYTHHQKTVILDADAGNNRRKIIAFVGGLDLCDGRYDTPQHPLFRTLQTVHNDDYHNPSYQGNTTGCPREPWHDLHCKIDGPAAYDVLTNFEERWVKASKPHGIKKLKKAYDDALLRIERLPDIHGISDAPWLSEDDPESWHVQVFRSIDSSSVKGFPKNPKEATSKNLVCGKNVLIDMSIHTAYVKAIRSAQHYIYIENQYFIGSSYNWNAHRDLGANNLIPMEIALKIADKIRAHERFAAYIVIPMWPEGIPSGSATQRILYWQNKTMQMMYETIYKALVEVGLEEAFTPQDYLNFFCLGNREVPDGSHSAGSGSIHPPNSPQALCLKNRRFMIYVHSKGMIVDDEYVILGSSNINQRSMEGTRDTEIAMGAYQPHYTWARKSAHPKGQIYGYRMSLWAEHLGLVDDCFNEPESIECVRKVRTLSEMNWKQFAAESVTEMAGHLLKYPVDVDRRGKVRPLLGSESFPDLGGNICGSFLGIQENVTI*

Click here to download the sequence:
Link to NCBI Protein BLAST