Transcript Information: R_Transcript_56276.p1


Annotated TAIR IDAT3G58180.1
Annotated Gene NameARM repeat superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:21544189-21545981 | Forward length=314
E-Value9.9E-128
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.414675870818
Replicate 23.6909922922023
Replicate 34.2908874459651
Condition 2: 8 Hour
Replicate 18.0443475619192
Replicate 24.4464001355672
Replicate 36.9049354521357
Condition 3: 24 Hour
Replicate 15.9544744970991
Replicate 24.3220680246664
Replicate 37.2538502564645


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56276.p1 GENE.R_Transcript_56276~~R_Transcript_56276.p1 ORF type:5prime_partial len:347 (+),score=88.95,HEAT_2|PF13646.2|1.2e+03,HEAT_2|PF13646.2|5e-17,HEAT_2|PF13646.2|34,HEAT_2|PF13646.2|8.8e-10,HEAT_PBS|PF03130.12|4.1e+03,HEAT_PBS|PF03130.12|6.2e-05,HEAT_PBS|PF03130.12|0.047,HEAT_PBS|PF03130.12|26,HEAT_PBS|PF03130.12|0.0072,HEAT_PBS|PF03130.12|3.6,HEAT|PF02985.18|3.7e+03,HEAT|PF02985.18|2.6e+02,HEAT|PF02985.18|0.55,HEAT|PF02985.18|0.093,HEAT|PF02985.18|9e+02,HEAT|PF02985.18|3.8e+02,HEAT|PF02985.18|0.066 R_Transcript_56276:3-1043(+)
ACCTCGGCCCCAATTCAAAGCCTCAAGCCTTCAACCAACCACAGACAAACTCACAAAGGGAGAAAGGAAAGAAGCAGAGCATCTGATTCTCTCCCTATCTCTCTCTACACTCTGTTTCCTCTAAACCCTCTTTCACTGTCTGTCTTGGACTCTCTTCTTGTGAGTTGGTTGGGTTTTAGCGTACAAAGAAATCACAGAGATAGAGAGATGGGTTCATTTGAAGCCCCAGAAGAGATGGTGAGATTTCTATGTGAGAGGCTTTTGGATGAATCCCAGCCAATTGCTGAGCGTTTCAGAGCTCTTTTCTCTCTTCGCAATCTGAAAGGCCCACTACCTCGTCATGCCCTCATTCAGGCTACTCGGGACTCTTCAAATTTATTGGCACATGAAGCGGCATTTGCATTGGGTCAGATGCAGGATGCGGATGCTATTCCTGCTCTAGAGTCCGTTCTCAATGACCTCTCTTTGCATCCGATCGTTCGCCATGAGGCTGCAGAGGCTCTTGGAGCAATAGGCCTGGAGAAGAATGTTTCTCTCTTGGAAAAGAGCTTGGTTTCTGATCCAGCTCCTGAGGTCAGAGAAACTTGTGAGTTAGCTCTACACAGGATTGAGGAACTGAAGAACAGCGCAACTGATGATAGAGGACCATCACCATACTTGTCAGTTGACCCAGCTGCTCCGGCTTCTTGTTCTTCTATCTCTGAACTAAGAGATGTGCTTCTGGATGAAGGCAAGGGCATGTATGAGAGATATGCTGCTTTATTCGCTCTTCGCAATGATGGTGGAGATGAGGCCGTCTCAGCCATTGTTGACTCTTTGGGAGCTAAAAGTGCTCTATTGCGCCATGAGGTTGCTTATGTCCTGGGCCAAATTCAAAACAAAGCTGCCTCAGCTGCCCTCATTAGGGTGCTTAAAGATGTTGCCGAGCACCCTATGGTCAGACATGAAGCCGCAGAAGCTCTTGGTTCCATTGCAGTATCACCCTTGCTTACATCTGAGTTGCTCCTCCCAAACTACTTTTATGGACCAATTGATAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56276.p1 GENE.R_Transcript_56276~~R_Transcript_56276.p1 ORF type:5prime_partial len:347 (+),score=88.95,HEAT_2|PF13646.2|1.2e+03,HEAT_2|PF13646.2|5e-17,HEAT_2|PF13646.2|34,HEAT_2|PF13646.2|8.8e-10,HEAT_PBS|PF03130.12|4.1e+03,HEAT_PBS|PF03130.12|6.2e-05,HEAT_PBS|PF03130.12|0.047,HEAT_PBS|PF03130.12|26,HEAT_PBS|PF03130.12|0.0072,HEAT_PBS|PF03130.12|3.6,HEAT|PF02985.18|3.7e+03,HEAT|PF02985.18|2.6e+02,HEAT|PF02985.18|0.55,HEAT|PF02985.18|0.093,HEAT|PF02985.18|9e+02,HEAT|PF02985.18|3.8e+02,HEAT|PF02985.18|0.066 R_Transcript_56276:3-1043(+)
TSAPIQSLKPSTNHRQTHKGRKERSRASDSLPISLYTLFPLNPLSLSVLDSLLVSWLGFSVQRNHRDREMGSFEAPEEMVRFLCERLLDESQPIAERFRALFSLRNLKGPLPRHALIQATRDSSNLLAHEAAFALGQMQDADAIPALESVLNDLSLHPIVRHEAAEALGAIGLEKNVSLLEKSLVSDPAPEVRETCELALHRIEELKNSATDDRGPSPYLSVDPAAPASCSSISELRDVLLDEGKGMYERYAALFALRNDGGDEAVSAIVDSLGAKSALLRHEVAYVLGQIQNKAASAALIRVLKDVAEHPMVRHEAAEALGSIAVSPLLTSELLLPNYFYGPIDR*

Click here to download the sequence:
Link to NCBI Protein BLAST