Transcript Information: R_Transcript_56286.p1


Annotated TAIR IDAT1G48620.1
Annotated Gene Namehigh mobility group A5
Annotated Gene Symbol(s)HON5
Annotation TypeOrtholog
Chromosome Positionchr1:17974148-17976301 | Reverse length=479
E-Value5E-47
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1103.42112897218
Replicate 2105.27902050844
Replicate 3111.84423295935
Condition 2: 8 Hour
Replicate 187.68318844469
Replicate 295.327969954528
Replicate 396.967814629962
Condition 3: 24 Hour
Replicate 1133.23893384985
Replicate 2109.33872271867
Replicate 3120.86975381752


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56286.p1 GENE.R_Transcript_56286~~R_Transcript_56286.p1 ORF type:complete len:494 (+),score=122.38,Linker_histone|PF00538.15|5.1e-09 R_Transcript_56286:242-1723(+)
ATGGAGCAACCAGCTGGTGAGCTGTCAGCCCCTAACGATGCACCTCCGCCTGCCTTTGCCGCTAATCCCACCCCAACCTCCTTTCCTCTTCCTCCCTCTCACCCTTCCTATGCCGAGATGATAACAGCAGCGATAGCATGGGACAGCTCGCAAGGAAAAGAAGGGGGATCCAGCAAGAGAGCAATAGCTAAGTACATCGACCGAGTTTACTCCAATCTCCCTCCTTCTCACTCGGCCTTGTTGACTCACCACCTAAAGCGTCTCAAGAATTCGGGTCATCTCATCATGGTCAAGAATTCTTACCAACTCTCATCCGCTGCACCTCCCCACACTGGATCTGCTCCTTCTCCCTCTCCATCTCCTGCCGTTGTTATCCCCCCACCTCCACCTTCTTCTTCTTCTTCTCCTAACCCTACCCCTAAAAGAGGCCCAGGCCGTCCTCCCAAGCCCAGGACTTTAGCCCAGCCCACTCCTGCTCTTGATAACGGTGGATCCCAGCCAACCAAGAAGCGTGGCCGTCCTCCTAGACAGCCCCAAATCCAGATGGCTGCTGCTGAGGTGCCTTTTATACAGGCACAACCTGAAGCCCAAGCTCAGCCCCCTGTCAATGACCAGCCTAAGCGGAGGCCTGGACGTCCTCCCAAGCAGCCGCCCGTTGTACCATTTGCTCCTCCTCCTGAGCCGCCCGTCAATGGGGCGGCCCCTGTAGCTGTAGTGGCTAAAAGAAGGCCGGGCCGTCCCCCGAAAGCCAATGTGGCTGGTGCTGCTGTTGGACGCCCCTCAATAGGTAGGCCCAGAGGAAGGCCCAAGAGGACCAACGCTTTAGGCCCAGTTTCAAGACCTGTTGGAAAGCGCCCACGTGGACGCCCACCTAAGCAGCAACAGCAGCAAGGTGGGGTTGTTGCTACTGCTACTGCGACGGTCTCTGGGAAGCGCCGTGGTAGGCCGCCAAAGGGGTCTGGCCCACCTAAGTTCAGAAGACTCTCTGGCAAACCATTAGGTCGCCCCAGAAAGGATGCTGCTACTTCGAGGAAGCTCACGCCTGGGCAGGGGATGGCAAATGAAGAACTGACAAGGAAGCTAGAGCTTATTCAATCAAGAGTTAGGGATGCTGTTGGTATACTCAGGCCTTATGTAGCTAATGAGAACGAAGCTTTGATTGCGCTGCAACAACTAGAAGAGGTTGTGGCACCTAATGCAACTGAACCTCCCACTGAACCACCTGTGGCAGCTATGCCAATGAGTGTGGTTGCCCCACTAAATGCATCTGTACCAGTGACTGCAGCTGTTCCTCCAAGTATGAATGCCCCACCTCCACCACCTTCGGTGACTAATGTCCCTGGACTGGTTATGAATGCTCCTGCACCGTTTAGTGTAACTCTGCCACCAATGACTGTAACTGCACCATTCCATGCACCTTCTTCTGGTGTTGAAAACCAACAGCCGTTGAGTTGGACTGCTTCCAGTGAAGCACAATTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56286.p1 GENE.R_Transcript_56286~~R_Transcript_56286.p1 ORF type:complete len:494 (+),score=122.38,Linker_histone|PF00538.15|5.1e-09 R_Transcript_56286:242-1723(+)
MEQPAGELSAPNDAPPPAFAANPTPTSFPLPPSHPSYAEMITAAIAWDSSQGKEGGSSKRAIAKYIDRVYSNLPPSHSALLTHHLKRLKNSGHLIMVKNSYQLSSAAPPHTGSAPSPSPSPAVVIPPPPPSSSSSPNPTPKRGPGRPPKPRTLAQPTPALDNGGSQPTKKRGRPPRQPQIQMAAAEVPFIQAQPEAQAQPPVNDQPKRRPGRPPKQPPVVPFAPPPEPPVNGAAPVAVVAKRRPGRPPKANVAGAAVGRPSIGRPRGRPKRTNALGPVSRPVGKRPRGRPPKQQQQQGGVVATATATVSGKRRGRPPKGSGPPKFRRLSGKPLGRPRKDAATSRKLTPGQGMANEELTRKLELIQSRVRDAVGILRPYVANENEALIALQQLEEVVAPNATEPPTEPPVAAMPMSVVAPLNASVPVTAAVPPSMNAPPPPPSVTNVPGLVMNAPAPFSVTLPPMTVTAPFHAPSSGVENQQPLSWTASSEAQL*

Click here to download the sequence:
Link to NCBI Protein BLAST