Transcript Information: R_Transcript_56351.p2


Annotated TAIR IDAT3G23910.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: RNA-directed DNA polymerase (reverse transcriptase)-related family protein (TAIR:AT3G24255.2); Has 562 Blast hits to 532 proteins in 147 species: Archae - 28; Bacteria - 51; Metazoa - 157; Fungi - 82; Plants - 85; Viruses - 6; Other Eukaryotes - 153 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8636594-8639344 | Reverse length=421
E-Value3E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0581426640417
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 31.0522672823413
Condition 3: 24 Hour
Replicate 11.6636092193989
Replicate 21.1187450161887
Replicate 31.2688524456172


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56351.p2 GENE.R_Transcript_56351~~R_Transcript_56351.p2 ORF type:complete len:138 (+),score=24.98 R_Transcript_56351:108-521(+)
ATGGACTCACACTCACAACCTCTCAATCTCGATTCTATTCGCAGTCAAATTGAAGAACTAACCACCTTCCTCAAAGAAGATCCCAGCAAAAACTCCTCACTTTCTCCTTCTGAATCCCAGCAACTGCTTCAAGAATGCCTTCAAGCTTTTCAGACCAAAGTGAAACAAATTGAGTCAGACCATTCTGATATTGGCCATTTCAATGATGAAGATCTGGATGCATACACGGATCGATTGAGACTTGAGCTTAAATTGGTAGAGGCTGATAATGCTTCAGTCTCTAAGGAAATTGAGGATCTAACACAATCGTATGTGGAAGGTACTTGTGAATTGGAGCGTAATCTTGTATCCTTGCGCCATATTGTGGATTCTATTGAATCAAAGGTTCGTTGTCTACATTCATTAGATATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56351.p2 GENE.R_Transcript_56351~~R_Transcript_56351.p2 ORF type:complete len:138 (+),score=24.98 R_Transcript_56351:108-521(+)
MDSHSQPLNLDSIRSQIEELTTFLKEDPSKNSSLSPSESQQLLQECLQAFQTKVKQIESDHSDIGHFNDEDLDAYTDRLRLELKLVEADNASVSKEIEDLTQSYVEGTCELERNLVSLRHIVDSIESKVRCLHSLDM*

Click here to download the sequence:
Link to NCBI Protein BLAST