Transcript Information: R_Transcript_56358.p1


Annotated TAIR IDAT5G52580.2
Annotated Gene NameRabGAP/TBC domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21338052-21342848 | Forward length=690
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 138.974787448906
Replicate 226.484695053993
Replicate 332.828348865003
Condition 2: 8 Hour
Replicate 133.081966471278
Replicate 244.21201713584
Replicate 359.999624771036
Condition 3: 24 Hour
Replicate 138.588654701886
Replicate 230.200286110046
Replicate 336.989555641079


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56358.p1 GENE.R_Transcript_56358~~R_Transcript_56358.p1 ORF type:complete len:658 (+),score=120.34,RabGAP-TBC|PF00566.14|2.4e-51,DUF3548|PF12068.4|0.097,DUF3548|PF12068.4|1.7e-20 R_Transcript_56358:240-2213(+)
ATGCTCGAAACCGAGGTTCATGATTTATCGGATGATGCCGATTACGCTGCATCTCAGCAACAAGGTTCACAGAGTATAATGCGAAGTGATAGTGGAAGGAGGAGCGAACCTGATGGTGCTGAAATTGTGTATATGAGGGATAATGTGTCGATTCATCCAACTCAGTACATGTCTGAGAGGATTAGTGGTAGATTGAAGTTGATTAAGCAAGGAGATTCTCTTTTCATGACGTGGATTCCCTACAAAGGACAAAACTCAAATGCAAGGCTCTCTGAGAGAGATAGGAATCTGTATACAATAAGGCCGCTGCCATTTACTGATGTGAGGTCCATCCGTAGGCATACTCCTCCACTTGGGTGGCAGTATATAATAGTAGTGCTGTCATCAGGACTTGCGTTTCCGCCTCTTTATTTCTACAATGGAGGAGTTAAGGAGTTTCTTGCTACTATCAAGCAACACGTGTTTCTTGTAAGGTCAGCTGATGATGCAAATGTGTTCGTCGTGAATGATTTCCAAGATCCTTTGCAGAAAACTCTCTCTTCTTTGGAGCTTCCTGGGGTTGTCTCTGTTGCTGCACCCTCTAGAAATGGTTCAGTTGCAGTATCCCCTACCAGTGTAAACCAAGAAAAGGTTGATGAAAGTGGCTATGATAGCAATACCAGTTCACAATCTGTTGGAAGGCAAAAGCATAAGGCCAATGATCCTGCTAGGGATATCTCAATTCAGGTGCTGGAGAAATTCTCTCTTGTTACCAAATTCGCCCGGGAAACAACCTCACAGCTGTTCCGTGAAAATAACGGTGATTCTTTTTTCTTAAATGATGGTCGGAAGCTTAGTCATAGCCAATCCGCACCTCACCTTCCACCTAAAGCTCCCACTGCTGACCTGCAAAAAGTTGCTGACGAAGTTCCTGTGCCGGCCGATCCTTTGGAGTTTGATAAATTGGCACTTGTTTGGGGAAAACCACGGCAGCAGCCTCTGACACAAGAAGAGTGGGTTACTTTCTTGGATTCTGAGGGACGAATTGTTGATTCGAAAGCTTTAAGAAAGAGGATATTTTATGGTGGTGTTGCCCATGAACTGCGAAAAGAGGTTTGGCCATTCTTGTTGGGATACTATGATCACAATTCGACATATGCGGAACGTGAATACCTTCGATCAGTGAGGAAACAAGATTATGAAATTATAAAGCTCCAATGGCAGAGCATATCTCCAGAGCAAGCAAAAAGATTTACAAAGTTTAGGGAGAGGAAGGGCCTAATCGAGAAGGATGTGGTAAGGACAGACAGATCATTTTCCTTCTTCGATGGAGACGATAATCCCAATATCAATCTCCTGTACGATATATTGCTGACTTATTCATTCTACAATTTTGACCTTGGTTATTGTCAGGGTATGAGTGATTATCTCTCGCCTTTATTGTTCGTCATGGAGGATGATTCTGAAGCATTTTGGTGTTTTGCTGCACTAATGGAACGAGTGGGGCCAAATTTTAATCGTGATCAGAGTGGCATGCATGCACAACTTTTTGCTTTATCAAAGCTGGTGGAACTATCTGACAGTCCATTGCATAACTATTTTAAGCAGAATGACTGCTTGAATTATTTCTTTTGTTTCCGGTGGATTCTTATACAATTCAAAAGGGAACTTCGCTATGAGGAAACACTGCGATTGTGGGAGGTTTTGTGGACGCATCATCTATCGGAGCACCTGCATCTGTATGTATGCGTTGCAATCCTGAAGAGGCACAGGAACAAGATTATTGGGGAGCAAATGGATTTCGACACGCTCTTGAAGTTCATAAATGAGCTAAGTGGTCACATCGACCTTGATGCAACTCTGAGAGATGCCGAGGCACTTTGTATTTGTGCTGGAGAAACTGGAGCAGCCTGCATTCCTCCCGGAACTCCTCCATCTTTGCCTGTGGACAGCGACAGTTTGGTCTCTTCTCAGCTAGAGGATGAAATATTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56358.p1 GENE.R_Transcript_56358~~R_Transcript_56358.p1 ORF type:complete len:658 (+),score=120.34,RabGAP-TBC|PF00566.14|2.4e-51,DUF3548|PF12068.4|0.097,DUF3548|PF12068.4|1.7e-20 R_Transcript_56358:240-2213(+)
MLETEVHDLSDDADYAASQQQGSQSIMRSDSGRRSEPDGAEIVYMRDNVSIHPTQYMSERISGRLKLIKQGDSLFMTWIPYKGQNSNARLSERDRNLYTIRPLPFTDVRSIRRHTPPLGWQYIIVVLSSGLAFPPLYFYNGGVKEFLATIKQHVFLVRSADDANVFVVNDFQDPLQKTLSSLELPGVVSVAAPSRNGSVAVSPTSVNQEKVDESGYDSNTSSQSVGRQKHKANDPARDISIQVLEKFSLVTKFARETTSQLFRENNGDSFFLNDGRKLSHSQSAPHLPPKAPTADLQKVADEVPVPADPLEFDKLALVWGKPRQQPLTQEEWVTFLDSEGRIVDSKALRKRIFYGGVAHELRKEVWPFLLGYYDHNSTYAEREYLRSVRKQDYEIIKLQWQSISPEQAKRFTKFRERKGLIEKDVVRTDRSFSFFDGDDNPNINLLYDILLTYSFYNFDLGYCQGMSDYLSPLLFVMEDDSEAFWCFAALMERVGPNFNRDQSGMHAQLFALSKLVELSDSPLHNYFKQNDCLNYFFCFRWILIQFKRELRYEETLRLWEVLWTHHLSEHLHLYVCVAILKRHRNKIIGEQMDFDTLLKFINELSGHIDLDATLRDAEALCICAGETGAACIPPGTPPSLPVDSDSLVSSQLEDEIL*

Click here to download the sequence:
Link to NCBI Protein BLAST