Transcript Information: R_Transcript_56399.p1


Annotated TAIR IDAT3G46020.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:16912511-16913250 | Reverse length=102
E-Value2.6E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.5985398123952
Replicate 211.584165746923
Replicate 315.995221942141
Condition 2: 8 Hour
Replicate 110.976422217731
Replicate 29.8310773612109
Replicate 314.39610497479
Condition 3: 24 Hour
Replicate 112.864288532765
Replicate 213.689471035531
Replicate 312.075974999667


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_56399.p1 GENE.R_Transcript_56399~~R_Transcript_56399.p1 ORF type:complete len:116 (+),score=19.85,RRM_1|PF00076.18|2e-22,RRM_1|PF00076.18|4e+02,RRM_6|PF14259.2|3.7e-15,RRM_5|PF13893.2|5.4e-13 R_Transcript_56399:205-552(+)
ATGAACAGGATAACTTCAACCTTCCGTTGCTTAACTACATCCAAGCCTCTGTACACAGCTGTCAGATTCAGCTCCGAGCTCTTTGTTAGTAGACTTTCATTTTACACTACAAGTGAGGAATTAAAGGGCATGTTTTCCCTATTTGGGGATGTCAAAGAAGTAAGGCTGATAACGGATCCCAGAACAGGAAGGCCAAAAGGGTTTGGTTTTGTAAAGTTTGAGACTGAGGTTGAGGCTCAAAATGCTGCAAAGGCTTTAAATGGCAGGATAGTCCAAGGACGAATCATTTTTGTGGAGTTCGCAAAACGCAGAAAGATGGAGGGAGAAGATAATGCACCTCTATATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_56399.p1 GENE.R_Transcript_56399~~R_Transcript_56399.p1 ORF type:complete len:116 (+),score=19.85,RRM_1|PF00076.18|2e-22,RRM_1|PF00076.18|4e+02,RRM_6|PF14259.2|3.7e-15,RRM_5|PF13893.2|5.4e-13 R_Transcript_56399:205-552(+)
MNRITSTFRCLTTSKPLYTAVRFSSELFVSRLSFYTTSEELKGMFSLFGDVKEVRLITDPRTGRPKGFGFVKFETEVEAQNAAKALNGRIVQGRIIFVEFAKRRKMEGEDNAPLY*

Click here to download the sequence:
Link to NCBI Protein BLAST