Transcript Information: R_Transcript_5640.p1


Annotated TAIR IDAT1G11950.1
Annotated Gene NameTranscription factor jumonji (jmjC) domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:4034747-4038310 | Reverse length=875
E-Value5.6E-71
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.49055426786
Replicate 211.714823245517
Replicate 312.818671038906
Condition 2: 8 Hour
Replicate 110.661891525042
Replicate 212.198527428263
Replicate 314.770722880663
Condition 3: 24 Hour
Replicate 116.743235238086
Replicate 212.360438964338
Replicate 315.401116708496


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_5640.p1 GENE.R_Transcript_5640~~R_Transcript_5640.p1 ORF type:complete len:1208 (+),score=359.98,JmjC|PF02373.18|3.2e-15,zf-4CXXC_R1|PF10497.5|3.1e-06,zf-4CXXC_R1|PF10497.5|1.3e+03,zf-4CXXC_R1|PF10497.5|6.2e+03 R_Transcript_5640:190-3624(+)
ATGGAAGAAGAGAAGAAGAACCCTAGGAAAAGGGGTAGGAAGGCTGTTGATAAAAACAAGGATGAAAACAAAAGGAGCAATGAAAGTGCTGAGGGTGAGAAACAGGTTGAAGAAAAAGAGAAACAAGAGATTAATGGAGGTGTTGAGGTTGAAGAACAAGTTGAAGAAGAAAAGGTGAAAGAAGTGGGTGATGAAAGCGTTGAGGGTGAGAAACAATTGGAAAAGGAGACCAGAATGAGGAGGAGCTGTGTTCAAAAGGGGAAAGATGAAGGCTTTGTTTATAAGGACGAGATAGAAGAAGATGAGGATGATGAGGCGAGAAAGGTTTTTACGAAGCGAAAGGGGCCAAAGAAGGGACGGGGTGGGAAAACTGCGGCAAAGGAGGATGGGAGAAGAAAAAAGAAACATGATGTTGAGAAGCGTACAACAAGTGCTGTGGAAAATGGCGAAGAGAAGAAATATGTTGAAGGGTGTGTTTCTGAAGGGCTTAGGAGGTCTGGCAGGAGTAGTGTCAGTAAAGTTTGTTATGAGGAGAAAAAACCCAAGACAAGGATTCGTATCCATGATGAAAATGGGATCAAGATTGATTCAACTATGTGCCATCAGTGTCAAAGGAATGACAAGGGAGATGTGATCAGGTGCACTAGATGTAAGACCAAACGTTTTTGTAAGCCCTGCATCCAAAACTGGTATCCCCGGATGACAGATGAACAGATTGCTCAAGCCTGCCCAGTCTGCCTTATGAACTGCAACTGCAAGGCATGCTTGCGAGCAGAGGGACCTGTCAAAAAACTGTTGGAGGCAAAGTTTGAGGTTAGAAAAGAAGAAAAGATTGAGCATTCCAAGAATTTGCTGAAGGGTATTTTGCCTTATGTGAAGCAATTTAATGAGGAACAAATGATGGAGAAGGAGGTAGAGGCCAAAATTCAGGGTGTACCACTATCTGAACTAAAAGTCCCATCAGCAAATTGTGATGCAGATGAGCGTATTTACTGCAACAACTGCAGAACTTCCATTTTCGATTTCCACAGAAGTTGCCCAAACTGCCAATATGATTTGTGTCTCACTTGCTGTCGAGAAATTCGTTCTGGACAGCTGCAGGGCAGTCAAGAGGAAGTCTTTATGGATTTTGCTGAGAGAGGGTTTAAGTATTTGCATGGTTTTGATTCTGATGACTCAGTAGAACCAGTGAAAAAACGTAGACTTCCTCGTCAGGCTAAGAAAAAAGCTACAGGTAGTGAAGCTGAGGAAAAACCTGCTGATAGTGAAGCTCAGGAAAAAACTGCATGTGGCCAAGCCAAGGAAAAATCTGAGTGGAAAGCAAATGACAATGGTACTATACAATGCCCACCCACAGCATATGGTGGTTGTAGTGGGAGCCTCCTTGAATTAAGATCTATTTTCTCAGATAGTTACATTGCAGAGTTATCGAATAAGGCAGAACAAATAGCAGCCACGTGGGAACTTGGGACTATATCCCTGCCACCTTCCTGTGGATGCTCATGTTCTGATTCTATGACTGATACTGGAATCGGAAGTAATACTCGGAAATGTGCTTCTAGAGAAGACTCCAATGACAACAACTTGTATTGCCCTGATGCCAGAGACCTCGAGCATGGAGATCTGAAGCATTTCCAATGGCATTGGGCTCGGGGGGAACCAGTAATTGTCAGGGATGTTCTTGAAACTGTGTTTGGTTTAAGCTGGGAGCCAATGGTCATGTGGCGTGCTGTCCGTCAAATTAGAAACACCAATCATTCCACACTTTTGGATGTGAAAGCCCTTGATTGCCTGGATTGGTGTGAGGTTGATGTCAATGTTCACCAATTTTTCAGTGGATATTCGAAGTGTCAGTTTGACTCTGCTGGCTGGCCTACCATACTAAAATTGAAAGATTGGCCACCTGGTACTGAATTTGAAAAGCAGTTGCCACGCCATGGTGCTGAATTTATTCATGCTTTGCCGTTTAAGCAGTATACACATCCCCGAGATGGCATTCTGAACCTTGCCGCTAAGTGGCCGGTAAACACGTTGAAGCCTGACTTAGGCCCCAAAACATATATTGCTTATGGGCTTCCTCAAGAGTTGGGTCGTGGTGATTCTGTTACGAAGCTTCATTGTGATATGTCTGACGCTGTCAATATTCTGACTCATACGGCAGAACTCTCTCTTAATGCTGTACAACTTCAGAAGGTTTCCAATTTGAAGAAGCGCCACATTCGTCAAGACCAACGGGAATTCTTTGGCATTGAATTACCAATGGAAAAGAGTGGCAGTGGCCAAGGAGATATGTTAGAGCAAGCTAGTTCCCGAAAAAGGCCTGGTAAACGAAAAAAAGATGAGTTGTCAGAGTTCCCTATTGAACAGAAAAATAGCAACAGTGGAATGTCTGATCCATCACCTACAGAGAGTGACAAAGTACTTCAGGTTGAACATTCAAATGAAGTCACTGAATTTTGCAAAGGAGAAATGTTAGACAACAAAGCGGTAGAAGGTGTTTCTAGAAAGATCAATGACACCATTGTCAACGTCAAATTAGGAGAATTAGATTCTGACAAGTGTTGTGGGAATGAAGGCTCTCTTCATACTGATGGGACTGGTGGTTCAGAGGGTGAGATGGTGCACAAAGCAGTTGAATGCCTGTCTGAAAAGGTGGATCAAGCCATTGCCAAAGTTGAAATAGGAGAAGAAAATCTGGATACACTTAATGGGAGTGAAGTCTCAGCTGCTGCATCCCACAGCTCTGATGGTACGGAGCATGAGACGGTTGACGATGGAAAGGTGGAAGGTTTGTGTGAAAAAATAAAAGAAGTCAATGACCATGTACAATTAGGAAAAGTAGATCTTGATCACTGTAGTGGAAGTGGAGCCTCAGCTCATGCTTTTGGTAGTTTTGATGGTTTCGAGCACAAGGATGGAGGTGCACTTTGGGACATCTTCCGGAGAGAGGATACCCCTAAACTGCAAGAGTATCTTAGAAAACACTATCGAGAATTTCGGCACATTCATTGTTCTCCTCTGAAACAGGTTGTTGACCCTATTCATGATCAGACATTCTACTTGACTGAGGACCATAAAAGGAAGCTCAAGGAAGAATATGGAATTGAGCCATGGACGTTTGTTCAGAAGCTTGGAGAAGCAGTCTTTATTCCTGCTGGCTGTCCTCACCAAGTAAGAAACTTGAAGTCATGCATCAAAGTTGCACTTGATTTTGTGTCACCAGAGAACATTAGTGAATGTATCCGGCTATCAGGGGAGTTCCGTGTTCTGCCTCACAATCACAGGGCTAAGGAGGATAAGTTGGAAGTGAAGAAAATGACTATCCATGCTGCGACACAACTTGTTGAAGACTTGAAGGAGTTTCTTCCTAGTTCTGATGCTGGCAAAAATGTGGTGGAAACTGAGAAGGGACAGCCCAGTTCTGTCCCTGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_5640.p1 GENE.R_Transcript_5640~~R_Transcript_5640.p1 ORF type:complete len:1208 (+),score=359.98,JmjC|PF02373.18|3.2e-15,zf-4CXXC_R1|PF10497.5|3.1e-06,zf-4CXXC_R1|PF10497.5|1.3e+03,zf-4CXXC_R1|PF10497.5|6.2e+03 R_Transcript_5640:190-3624(+)
MEEEKKNPRKRGRKAVDKNKDENKRSNESAEGEKQVEEKEKQEINGGVEVEEQVEEEKVKEVGDESVEGEKQLEKETRMRRSCVQKGKDEGFVYKDEIEEDEDDEARKVFTKRKGPKKGRGGKTAAKEDGRRKKKHDVEKRTTSAVENGEEKKYVEGCVSEGLRRSGRSSVSKVCYEEKKPKTRIRIHDENGIKIDSTMCHQCQRNDKGDVIRCTRCKTKRFCKPCIQNWYPRMTDEQIAQACPVCLMNCNCKACLRAEGPVKKLLEAKFEVRKEEKIEHSKNLLKGILPYVKQFNEEQMMEKEVEAKIQGVPLSELKVPSANCDADERIYCNNCRTSIFDFHRSCPNCQYDLCLTCCREIRSGQLQGSQEEVFMDFAERGFKYLHGFDSDDSVEPVKKRRLPRQAKKKATGSEAEEKPADSEAQEKTACGQAKEKSEWKANDNGTIQCPPTAYGGCSGSLLELRSIFSDSYIAELSNKAEQIAATWELGTISLPPSCGCSCSDSMTDTGIGSNTRKCASREDSNDNNLYCPDARDLEHGDLKHFQWHWARGEPVIVRDVLETVFGLSWEPMVMWRAVRQIRNTNHSTLLDVKALDCLDWCEVDVNVHQFFSGYSKCQFDSAGWPTILKLKDWPPGTEFEKQLPRHGAEFIHALPFKQYTHPRDGILNLAAKWPVNTLKPDLGPKTYIAYGLPQELGRGDSVTKLHCDMSDAVNILTHTAELSLNAVQLQKVSNLKKRHIRQDQREFFGIELPMEKSGSGQGDMLEQASSRKRPGKRKKDELSEFPIEQKNSNSGMSDPSPTESDKVLQVEHSNEVTEFCKGEMLDNKAVEGVSRKINDTIVNVKLGELDSDKCCGNEGSLHTDGTGGSEGEMVHKAVECLSEKVDQAIAKVEIGEENLDTLNGSEVSAAASHSSDGTEHETVDDGKVEGLCEKIKEVNDHVQLGKVDLDHCSGSGASAHAFGSFDGFEHKDGGALWDIFRREDTPKLQEYLRKHYREFRHIHCSPLKQVVDPIHDQTFYLTEDHKRKLKEEYGIEPWTFVQKLGEAVFIPAGCPHQVRNLKSCIKVALDFVSPENISECIRLSGEFRVLPHNHRAKEDKLEVKKMTIHAATQLVEDLKEFLPSSDAGKNVVETEKGQPSSVPE*

Click here to download the sequence:
Link to NCBI Protein BLAST